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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr03330.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | AP2 | ||||||||
Protein Properties | Length: 307aa MW: 35310.8 Da PI: 7.5816 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 40.4 | 7.3e-13 | 43 | 98 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +kGV++++++gr++A+++d ++n ++k+ + g ++ +e Aa+a++ a++k++g Dr03330.1 43 IFKGVTRHRWTGRYEAHLWDkNCWNEsQNKKGRQGAYDDEETAARAYDLAALKYWG 98 69******************99998898888888********************98 PP | |||||||
2 | AP2 | 48.8 | 1.7e-15 | 141 | 192 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++++grW+A+I + ++ +k+ +lg++ t+eeAa a++ a+ k++g Dr03330.1 141 SKYRGVARHHQNGRWEARIGRV-IG--NKYLYLGTYATEEEAAFAYDVAAIKYRG 192 89****************9884.22..4*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MDSLAKEKIS KRRSSECSNE ERLKVKRMGK RVARDSPTQR TSIFKGVTRH RWTGRYEAHL 60 WDKNCWNESQ NKKGRQGAYD DEETAARAYD LAALKYWGPQ TTLNFPLSAY EEELKEMEGQ 120 SREEYIGSLR RKSNGFSRGV SKYRGVARHH QNGRWEARIG RVIGNKYLYL GTYATEEEAA 180 FAYDVAAIKY RGINAVTNFD LSLYINNTEI PNPNPNPNPN PNTNPNPNYK DENSLAKQSF 240 HQSSEINEIL KSASSTTNHQ RSGCNFPDDI QTYFEFKNEE NYTGNDDDDD AIFGDIINSF 300 ISPILQW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79700.2 | 1e-87 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr03330.1 |