PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr03234.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | LBD | ||||||||
Protein Properties | Length: 153aa MW: 17382.7 Da PI: 7.8435 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 127.6 | 5.9e-40 | 14 | 114 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrr+C++dC+l+pyfpa++p++fa+vh++FGasnv ++l+ lp ++r +a++s+ +eA++ra+dPvyG+v++i+ lq+++ ++++ela+++++ Dr03234.1 14 RCAACKYLRRRCSADCILSPYFPASHPQRFACVHRIFGASNVARMLQILPVHQRAQAAESISFEAHWRAQDPVYGCVRIINMLQHEIYESQQELARTQAQ 113 6***********************************************************************************************9988 PP DUF260 101 l 101 l Dr03234.1 114 L 114 5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence |
MSESNSNSAS NSRRCAACKY LRRRCSADCI LSPYFPASHP QRFACVHRIF GASNVARMLQ 60 ILPVHQRAQA AESISFEAHW RAQDPVYGCV RIINMLQHEI YESQQELART QAQLAMYTAR 120 QPTEASSVIA QPQENLILDN SNFLNFQDLH DLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26660.1 | 4e-44 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr03234.1 |