PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr03230.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GATA
Protein Properties Length: 292aa    MW: 31912.7 Da    PI: 7.6142
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr03230.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.65.3e-16211247135
       GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                C++Cg     Tp++Rrgp+g++tLCnaCGl+++ kg+
  Dr03230.1 211 CHHCGINAksTPMMRRGPNGPRTLCNACGLMWANKGT 247
                ****865555************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MSENPGSAGE VKPPPAGAIQ YDSAMDASGE HQEVQMYGRE RQEMNGEEHD GVAEVEGMDA  60
DHPTDLSNLG DHIGLIVPPI GSNQLTLSFQ GEVYVFDSVS PEKVQAVLLL LGGREIAGGL  120
GSLPSSSHSY KRSNFPQRVA SLMRFREKRK ERNFDKKIRY TVRKEVALRM QRNKGQFTSS  180
KSKTEDVTST TSWDTSQRWG ADDRPQAAVA CHHCGINAKS TPMMRRGPNG PRTLCNACGL  240
MWANKGTLRD LSKNPTPPPP LSLPELKEGN GTSEARVEQQ PSVITANGHN MS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.21e-76GATA family protein