PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr03006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | GATA | ||||||||
Protein Properties | Length: 127aa MW: 13439.4 Da PI: 9.7694 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 56.3 | 4.4e-18 | 64 | 96 | 1 | 33 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 C C t+TplWR+gpdg+ktLCnaCG+++rk+ Dr03006.1 64 CMFCSDTSTPLWRNGPDGPKTLCNACGIRHRKE 96 889****************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence |
MGDHHDLGLA LWARSGGASS SVTKKALVER DLLGLMEETN YQNSGVDVAL TLGVSDPSPG 60 IKKCMFCSDT STPLWRNGPD GPKTLCNACG IRHRKEVNKI ITDLTLGPTP PPQRASGGGG 120 KVARKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18380.1 | 1e-14 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr03006.1 |