PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr02965.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bZIP

Protein Properties

Length: 443aa MW: 47137.6 Da PI: 5.9111

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr02965.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	69.7	4.6e-22	330	392	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL+++v++L+ eN +L+ e+++++ke+++l +++ Dr02965.1 330 ERELKRQRRKQSNRESARRSRLRKQAECEELAQRVESLKDENNSLRAEVNQIRKEYEQLLAQN 392 89*********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MGSSDAETQA KAGKTSAAQV QDLEQPAATN SSATPPGYPD WSGFQAYSPI PPHGFFPSPV 60 ASSPQAHPYM WGTQHIMAPY GTPPHPYVMY PPGGLYAHPS MPPGSHPFSP YAMPSPNGNV 120 EVSGAVTSGA EVDGKSPEGK EKSHLKRTRG SLGSLNMITG KNNNEPAKTS GPLANGVFSQ 180 SGESGSEASS EGSDANSQNT HTHPLWIILL IVQDSQPKAG GGHESFEAET SQEGTAARDP 240 QNGVSRASSQ SALNQTLPII PVPAAAGTSG GVAGPTTNLN IGMDYWGAPA AAISPIRGKV 300 PATTVPGAVV PGGFVGSREN VPTEMWLQDE RELKRQRRKQ SNRESARRSR LRKQAECEEL 360 AQRVESLKDE NNSLRAEVNQ IRKEYEQLLA QNASLKEKLG EQPRXTGDSR PDDNDQHAGE 420 DBHRKNXDSD ARPTQEDLDQ GSH

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MGSSDAETQA KAGKTSAAQV QDLEQPAATN SSATPPGYPD WSGFQAYSPI PPHGFFPSPV  60
ASSPQAHPYM WGTQHIMAPY GTPPHPYVMY PPGGLYAHPS MPPGSHPFSP YAMPSPNGNV  120
EVSGAVTSGA EVDGKSPEGK EKSHLKRTRG SLGSLNMITG KNNNEPAKTS GPLANGVFSQ  180
SGESGSEASS EGSDANSQNT HTHPLWIILL IVQDSQPKAG GGHESFEAET SQEGTAARDP  240
QNGVSRASSQ SALNQTLPII PVPAAAGTSG GVAGPTTNLN IGMDYWGAPA AAISPIRGKV  300
PATTVPGAVV PGGFVGSREN VPTEMWLQDE RELKRQRRKQ SNRESARRSR LRKQAECEEL  360
AQRVESLKDE NNSLRAEVNQ IRKEYEQLLA QNASLKEKLG EQPRXTGDSR PDDNDQHAGE  420
DBHRKNXDSD ARPTQEDLDQ GSH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	347	353	RRSRLRK
2	347	354	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-125	bZIP family protein

Link Out ? help Back to Top
Ensembl	Dr02965.1