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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr02193.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 236aa MW: 26940.7 Da PI: 5.9277 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 77.9 | 7.5e-25 | 21 | 71 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKA+EL +LCd++v +i+fs +gkl +y+s Dr02193.1 21 KKIDNATARQVTFSKRRRGLFKKAQELAILCDVDVGLIVFSASGKLSDYAS 71 68***********************************************86 PP | |||||||
2 | K-box | 50.1 | 1.2e-17 | 106 | 184 | 21 | 100 |
K-box 21 lakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +a +k+ ++L++ R++ GedL+ L+l+eL +Le+ ++ +l ++ ++K + ++e+++ lq+k +l eenk+L++k+ee Dr02193.1 106 AALMKDYADQLRQL-RQMRGEDLQGLTLEELVHLERTIDIGLARVIERKGQQIMEELNSLQQKGMQLLEENKRLKEKMEE 184 55677777888776.**************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MALNSEREKQ RSMARDKIKI KKIDNATARQ VTFSKRRRGL FKKAQELAIL CDVDVGLIVF 60 SASGKLSDYA SSSMCEILHK HSIQPDNSVK PDEQTLDLLK NNSGYAALMK DYADQLRQLR 120 QMRGEDLQGL TLEELVHLER TIDIGLARVI ERKGQQIMEE LNSLQQKGMQ LLEENKRLKE 180 KMEEMCMVEK QAVIDHDPMN GFHEDVQCSS ESVPEHCDQP SDTSLKLGLP SSDHWE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 6e-68 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr02193.1 |