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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr02192.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 216aa MW: 24472 Da PI: 6.9428 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 81.8 | 4.3e-26 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +i+n + rqvtfskRr g++KKA+EL +LCd++v +iifs++gkl+ey+s Dr02192.1 10 KIDNATARQVTFSKRRRGLFKKAQELAILCDVDVGLIIFSPSGKLFEYAS 59 69**********************************************86 PP | |||||||
2 | K-box | 49.5 | 1.9e-17 | 96 | 171 | 24 | 99 |
K-box 24 LkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 Lkke+ r++R++ GedL+ L+l+eL++Le+ ++ +l+++ ++K++ ++eq+++lq+k +l e+n++L++k+e Dr02192.1 96 LKKEYADKMRQLRQMRGEDLQGLTLEELMHLERTIDVGLTRVLQTKEQQIMEQLNRLQQKGMQLLEDNQKLKEKVE 171 666665555678*************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MAREKIKIRK IDNATARQVT FSKRRRGLFK KAQELAILCD VDVGLIIFSP SGKLFEYASS 60 SMCEILHKHS THAEDPLKPS QQALDFLTGN GPDAGLKKEY ADKMRQLRQM RGEDLQGLTL 120 EELMHLERTI DVGLTRVLQT KEQQIMEQLN RLQQKGMQLL EDNQKLKEKV EGMCMTEKQA 180 LIDHEPVNGS HEDGQCSSDS VPQHCDHTSD TSLKLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 8e-71 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr02192.1 |