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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr02191.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 275aa MW: 31551.3 Da PI: 7.4112 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 79.6 | 2.1e-25 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g+lKKA+EL +LCda+v +i+fs +gkl+ey+s Dr02191.1 9 KKIDNATARQVTFSKRRRGLLKKAQELAILCDADVGLIVFSASGKLFEYAS 59 68***********************************************86 PP | |||||||
2 | K-box | 53.3 | 1.2e-18 | 91 | 172 | 19 | 100 |
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +a Lkke++ r++R++ GedL++L+l+eL++Le+ ++ +l+ + ++K ++eq++ lq+ke +l eenk+L++k+ee Dr02191.1 91 SRYAGLKKEYDDKNRQLRQMRGEDLQELTLEELMHLERTIDIGLTCVLERKGLQIMEQLSSLQQKEMQLLEENKRLKEKVEE 172 56889**************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MTREKIKIKK IDNATARQVT FSKRRRGLLK KAQELAILCD ADVGLIVFSA SGKLFEYASL 60 SMCEILRKHS MQLDNTLKQG NQTVDSLTGN SRYAGLKKEY DDKNRQLRQM RGEDLQELTL 120 EELMHLERTI DIGLTCVLER KGLQIMEQLS SLQQKEMQLL EENKRLKEKV EEMRMVEKQP 180 LINQDQVNGF HEDGQCSSVL VPQDCDHTSD TLLKLGLNLD EDEIKFSNNI STSQTKIIKE 240 DQTWVKFGKK IGRSSVTIFG EMVARDLVGT PLEKW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 2e-61 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr02191.1 |