PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr01973.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

CAMTA

Protein Properties

Length: 1012aa MW: 112665 Da PI: 7.522

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr01973.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176.4	3.8e-55	21	135	3	117
CG-1 3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlL 102 + k+rwl+++ei++iL n++k++lt +++ +p+sgsl+L++rk +ryfrkDG+sw+kkkdgktvrE+hekLK g+++vl+cyYah+e+n++fqrr+ywlL Dr01973.1 21 EAKTRWLRPTEICEILRNYQKFSLTPDPPYKPSSGSLFLFDRKXLRYFRKDGHSWRKKKDGKTVREAHEKLKSGSIDVLHCYYAHGEDNENFQRRSYWLL 120 559*********************************************************************************************** PP CG-1 103 eeelekivlvhylev 117 + +le+ivlvhy++v Dr01973.1 121 DGNLEHIVLVHYRDV 135 ***********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1012 aa Download sequence
MAEPRRFSLN SQLDIGQIVL EAKTRWLRPT EICEILRNYQ KFSLTPDPPY KPSSGSLFLF 60 DRKXLRYFRK DGHSWRKKKD GKTVREAHEK LKSGSIDVLH CYYAHGEDNE NFQRRSYWLL 120 DGNLEHIVLV HYRDVNEGIN SSVPCLLNSD PGSINCTFGA QSSSGQSLSS EFEEADSVVD 180 YGDPAGFGKP INAFYLPQGH PQNSTLSEGQ HIAHGTSQLT GLHCQINCGV DASSSTLPET 240 LNYAINXSTK TEILRKYADF QEQKILSVQP NCASSMPVAM TDSVMCSDKG TYDKQELLTG 300 SPEHAIMGSD TRSVQVKEVY KPNAYNPVNP KLEVDGAPDT YHVPDEYHFS AAPQXGSTKD 360 SQVNFTASGQ HLDFTNEVSY LKEYALGDVD YREHGDLKKL DSFGRWMNKE MGRDCDNSLM 420 TSESGSYLRS FDTQNDSKEV TSLFRHMQLD MDLLGPSISQ NQSFSIIDFS PDWAWAFSKV 480 ETKVLISGTF LGGIDPSSIK WCCMFGEHEV SAEVLTGNVL RCQAPSHAPG RVPFYVTCSN 540 RLACSEVREF EFREDFINST LVSREKIHLQ VQFAKLLSAR XVACPLENCT KCALVNELFL 600 NVSMDDNGWD RLKEQSKASS VHKGDVADVL IQMLLKGKLX DWLHAKVHKE GRGPNILDEE 660 GLGAIHYAAA LGYEWAIWPI VSAGGNPNFR DAHGKTGLHW AAFYGREEAV VQLIRLGTAP 720 GAVQDPTSAS PGGHTAADLA SNRGHKGIAG YLAEADLISH LSAITLKDNM MGNDSVDLAA 780 KKAIEAVQDS SVDPADGKKD EQIPFQGSLA AVWNSAQAAA RIQSAFRVLS FRXRQLMRLK 840 DEKPEIXNEA IIVSSLSSKL QKLNHYXDAL RAAAAVKIQX KYFGWRGRTB FLKIRDRIVK 900 IQAHVRGHQV RKQYKKVVWS VSIVEKAILR WRRKGAGLRG FHADKLGGSV APKDGTTDDY 960 EFLSLGRKQK AAAVEKALAR VQSMARNXEG RDQYMRLVTS SSRSKVIILV YY

Sequence ? help Back to Top

Protein Sequence Length: 1012 aa Download sequence

MAEPRRFSLN SQLDIGQIVL EAKTRWLRPT EICEILRNYQ KFSLTPDPPY KPSSGSLFLF  60
DRKXLRYFRK DGHSWRKKKD GKTVREAHEK LKSGSIDVLH CYYAHGEDNE NFQRRSYWLL  120
DGNLEHIVLV HYRDVNEGIN SSVPCLLNSD PGSINCTFGA QSSSGQSLSS EFEEADSVVD  180
YGDPAGFGKP INAFYLPQGH PQNSTLSEGQ HIAHGTSQLT GLHCQINCGV DASSSTLPET  240
LNYAINXSTK TEILRKYADF QEQKILSVQP NCASSMPVAM TDSVMCSDKG TYDKQELLTG  300
SPEHAIMGSD TRSVQVKEVY KPNAYNPVNP KLEVDGAPDT YHVPDEYHFS AAPQXGSTKD  360
SQVNFTASGQ HLDFTNEVSY LKEYALGDVD YREHGDLKKL DSFGRWMNKE MGRDCDNSLM  420
TSESGSYLRS FDTQNDSKEV TSLFRHMQLD MDLLGPSISQ NQSFSIIDFS PDWAWAFSKV  480
ETKVLISGTF LGGIDPSSIK WCCMFGEHEV SAEVLTGNVL RCQAPSHAPG RVPFYVTCSN  540
RLACSEVREF EFREDFINST LVSREKIHLQ VQFAKLLSAR XVACPLENCT KCALVNELFL  600
NVSMDDNGWD RLKEQSKASS VHKGDVADVL IQMLLKGKLX DWLHAKVHKE GRGPNILDEE  660
GLGAIHYAAA LGYEWAIWPI VSAGGNPNFR DAHGKTGLHW AAFYGREEAV VQLIRLGTAP  720
GAVQDPTSAS PGGHTAADLA SNRGHKGIAG YLAEADLISH LSAITLKDNM MGNDSVDLAA  780
KKAIEAVQDS SVDPADGKKD EQIPFQGSLA AVWNSAQAAA RIQSAFRVLS FRXRQLMRLK  840
DEKPEIXNEA IIVSSLSSKL QKLNHYXDAL RAAAAVKIQX KYFGWRGRTB FLKIRDRIVK  900
IQAHVRGHQV RKQYKKVVWS VSIVEKAILR WRRKGAGLRG FHADKLGGSV APKDGTTDDY  960
EFLSLGRKQK AAAVEKALAR VQSMARNXEG RDQYMRLVTS SSRSKVIILV YY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	Dr01973.1