PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr01578.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | GATA | ||||||||
Protein Properties | Length: 234aa MW: 26410.5 Da PI: 9.3622 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 30.4 | 5.5e-10 | 122 | 141 | 1 | 20 |
GATA 1 CsnCgttkTplWRrgpdgnk 20 Cs C+ttkTplWR+gp+g+k Dr01578.1 122 CSDCNTTKTPLWRSGPQGPK 141 ******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MTTPISPTKL NQDNQSDHHL FNPRTTSFPC TIFFKTLQDQ AASGSDHTNP DHQHDHHQQK 60 KKDDLQTHQN NTCDDQCSRD HEEDTNKSTK WMSSTMRLMR KMTNQESIRN SPSGCNTFIX 120 VCSDCNTTKT PLWRSGPQGP KRKARRAMAA AAVAGDTGII PTDTLKKVKK QKGSNVDQSM 180 PFKKRCKILS SQENDKKKHW FELSKSLSLY SVLPPDERDA AILLMALSYG LICG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26150.1 | 1e-15 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr01578.1 |