PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr01024.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bZIP

Protein Properties

Length: 465aa MW: 50355.8 Da PI: 6.3071

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr01024.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.5	4.6e-16	265	321	3	59
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 +lkr rr+ +NRe+ArrsR+RK+a + eLe v +L eN++L k+l +++++ + Dr01024.1 265 DLKRVRRMLSNRESARRSRRRKQAHLSELEAQVSQLRVENSSLLKRLTDINQKYNEA 321 79*********************************************9999998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MESTSFLNHA KRRLFVPIPR YSCRIPAGIA RRIARTGEME RVFSVEEIAD PFWAPSPAAT 60 GGGRGAPRGV MNRSSSEWFF EKFLEEASVP EKQASSLIVP ALGDSMVGNR GDANAPAPSV 120 VSSSSNGAKN DDEVVEIKII DGDFDRGDAS GTQRPEEMEA GMDPGEYAAF LKQKLDMYCA 180 AVAMSRGSGV QPQDSSSLAE INSQASHTSH SPKGGGAVGT LGLHVEQYSK IQGKPANSSS 240 SREQSDDDDE VEGEAEITKN KDPSDLKRVR RMLSNRESAR RSRRRKQAHL SELEAQVSQL 300 RVENSSLLKR LTDINQKYNE AAVDNRILKA DVETLRAKVK MAEDSVKRVT GVNPMYPTMS 360 DMSSITVPFS GSPSDATSDA AVPVQEDQSH FFQASQHDQG FGAHLPDATT ATSVTESAHG 420 VVAPENTRRT ASMQRVASLE HLQKRMHGGS NICGSTQWDT SANNK

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MESTSFLNHA KRRLFVPIPR YSCRIPAGIA RRIARTGEME RVFSVEEIAD PFWAPSPAAT  60
GGGRGAPRGV MNRSSSEWFF EKFLEEASVP EKQASSLIVP ALGDSMVGNR GDANAPAPSV  120
VSSSSNGAKN DDEVVEIKII DGDFDRGDAS GTQRPEEMEA GMDPGEYAAF LKQKLDMYCA  180
AVAMSRGSGV QPQDSSSLAE INSQASHTSH SPKGGGAVGT LGLHVEQYSK IQGKPANSSS  240
SREQSDDDDE VEGEAEITKN KDPSDLKRVR RMLSNRESAR RSRRRKQAHL SELEAQVSQL  300
RVENSSLLKR LTDINQKYNE AAVDNRILKA DVETLRAKVK MAEDSVKRVT GVNPMYPTMS  360
DMSSITVPFS GSPSDATSDA AVPVQEDQSH FFQASQHDQG FGAHLPDATT ATSVTESAHG  420
VVAPENTRRT ASMQRVASLE HLQKRMHGGS NICGSTQWDT SANNK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	287	RRSRRRKQ
2	282	287	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	1e-53	bZIP family protein

Link Out ? help Back to Top
Ensembl	Dr01024.1