PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr00811.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

Protein Properties

Length: 922aa MW: 101656 Da PI: 7.3107

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr00811.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.1	1.6e-18	397	496	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 f+k+l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L +gD+v+F++++ e++lv+++ Dr00811.1 397 FEKILSASDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDATGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLLAGDIVTFSRID-PEGRLVMGF 494 99************************555566778***********99899999999.*******************987.677777777 PP E- CS B3 97 fr 98 ++ Dr00811.1 495 RK 496 66 PP

Sequence ? help Back to Top
Protein Sequence Length: 922 aa Download sequence
MASVGAAASK AARICFNSHC KEAKPEAAPV RKGWRLRSGE YADLCDRCCG NYEQGTFCET 60 FHSDDAGWRN CESCRKRVHC GCIVSNQAYL LLDAGGVECI ACVRKALVSA PNQMRPSPSF 120 LPLQQASERP KDLPTKSWNQ MSSYPGQWRQ MPKIWNLSNQ TELQRRISYE FDRPSSSEKL 180 ISGVRPSICV PEKKADDLSE RMAFSSLSHH VVRDRYVNGN NGLDSVSAFN TYHQDERNVD 240 GTPDSGHPRG ETDPLSVRKG AMPPPSSVSS SGVNFEVYPG SSVSTPVPPV YVKDESPSPM 300 VGLSAPYPLS RDSNDQSRLL ANQPAGQTTQ SMGKQLFLTP NNVNDSNADS NFQMRNGRPK 360 VDSRGRNHLL SRYCPRITSE ELQQISGDSN SVITPLFEKI LSASDAGRIG RLVLPKKCAE 420 AYFPPISQPE GLPLKVQDAT GKEWVFQFRF WPNNNSRMYV LEGVTPCIQS MQLLAGDIVT 480 FSRIDPEGRL VMGFRKASSI STEQENQPNR NGNSFATPSD ANNRNNAIET IANTSMRPSK 540 GATEPKISIN AEDQANQSNF DKVGFIQKDG PGSKASPGPS KRKGSALGSK SKRLRIENED 600 SIELKLTWEE AQELLRPSAN PASNVVVIDG HEIEEFEEAP VIGKPTFFST DLSGEIRQWA 660 QCENCSKWRK LPANALLPFR WTCSDNKWDQ ERASCASPQE LSKEEFAALL PTNNGVSKKS 720 KTKVENETVE VSDGLDTLAN LAILGEGEAL PSSSQATTKH PRHRPGCTCI VCIQPPSGKG 780 PKHQQTCTCN VCLTVKRRFR TLMLRRERRQ SEKEAEKKQQ LIQSSGMLPQ VVDQTMPANN 840 NLPSATATPE KLVNEDVTLE EESEQKPVMT AAAASLSPVK ATIDLNIQPE REEEPSQPRD 900 LTDIPNSRGW LPRTDTEGEA AE

Sequence ? help Back to Top

Protein Sequence Length: 922 aa Download sequence

MASVGAAASK AARICFNSHC KEAKPEAAPV RKGWRLRSGE YADLCDRCCG NYEQGTFCET  60
FHSDDAGWRN CESCRKRVHC GCIVSNQAYL LLDAGGVECI ACVRKALVSA PNQMRPSPSF  120
LPLQQASERP KDLPTKSWNQ MSSYPGQWRQ MPKIWNLSNQ TELQRRISYE FDRPSSSEKL  180
ISGVRPSICV PEKKADDLSE RMAFSSLSHH VVRDRYVNGN NGLDSVSAFN TYHQDERNVD  240
GTPDSGHPRG ETDPLSVRKG AMPPPSSVSS SGVNFEVYPG SSVSTPVPPV YVKDESPSPM  300
VGLSAPYPLS RDSNDQSRLL ANQPAGQTTQ SMGKQLFLTP NNVNDSNADS NFQMRNGRPK  360
VDSRGRNHLL SRYCPRITSE ELQQISGDSN SVITPLFEKI LSASDAGRIG RLVLPKKCAE  420
AYFPPISQPE GLPLKVQDAT GKEWVFQFRF WPNNNSRMYV LEGVTPCIQS MQLLAGDIVT  480
FSRIDPEGRL VMGFRKASSI STEQENQPNR NGNSFATPSD ANNRNNAIET IANTSMRPSK  540
GATEPKISIN AEDQANQSNF DKVGFIQKDG PGSKASPGPS KRKGSALGSK SKRLRIENED  600
SIELKLTWEE AQELLRPSAN PASNVVVIDG HEIEEFEEAP VIGKPTFFST DLSGEIRQWA  660
QCENCSKWRK LPANALLPFR WTCSDNKWDQ ERASCASPQE LSKEEFAALL PTNNGVSKKS  720
KTKVENETVE VSDGLDTLAN LAILGEGEAL PSSSQATTKH PRHRPGCTCI VCIQPPSGKG  780
PKHQQTCTCN VCLTVKRRFR TLMLRRERRQ SEKEAEKKQQ LIQSSGMLPQ VVDQTMPANN  840
NLPSATATPE KLVNEDVTLE EESEQKPVMT AAAASLSPVK ATIDLNIQPE REEEPSQPRD  900
LTDIPNSRGW LPRTDTEGEA AE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-137	B3 family protein

Link Out ? help Back to Top
Ensembl	Dr00811.1