PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr00797.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 256aa MW: 29197.5 Da PI: 9.3961 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84.3 | 7.4e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCda++ +i+fsstg+ly+yss Dr00797.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDADIGLIVFSSTGRLYDYSS 59 8***********************************************96 PP | |||||||
2 | K-box | 83.5 | 4.6e-28 | 81 | 171 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++ + +q+e++ L+++++nLq+++R+llGedL L++k+Lq++e+qLe sl+++R+kK+++l+e+i+el +k k +q+en++L kk++ Dr00797.1 81 SLSSEIKFWQKEATSLRQQLHNLQETHRQLLGEDLLGLTVKDLQSIENQLEISLRNVRTKKEQVLTEEINELNRKGKLIQQENMELYKKVQ 171 4567899*********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD ADIGLIVFSS TGRLYDYSST 60 NMKSIIDRYN KAKEVHNQEL SLSSEIKFWQ KEATSLRQQL HNLQETHRQL LGEDLLGLTV 120 KDLQSIENQL EISLRNVRTK KEQVLTEEIN ELNRKGKLIQ QENMELYKKV QFVCQESMGL 180 QNKVYAVWGS NVGVITRGSM IPCAFSITED AHVPVHLELS QPQPQPQKHG QEQTDISQMT 240 APKLRLQLQC DGALPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.1 | 9e-95 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr00797.1 |