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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr00691.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | AP2 | ||||||||
Protein Properties | Length: 316aa MW: 35215.8 Da PI: 5.0367 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 30.1 | 1.2e-09 | 132 | 188 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpse..ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+ k++g+++A+++d ++ g krk + g++ ++e+Aa+ ++ a++k++g Dr00691.1 132 SNYHGVTKLKWSGKFEAHLWDNTShvEGrKRKGKH-GSYESEEQAARSHDLAALKYFG 188 569******************66668777778888.99******************98 PP | |||||||
2 | AP2 | 55.3 | 1.6e-17 | 235 | 288 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpseng.kr..krfslgkfgtaeeAakaaiaarkklege 56 y+GV++++k+g+W A+I + g r k ++lg+f+t+eeAa+a++ a+ +l+g+ Dr00691.1 235 YRGVTRRRKDGKWQARIGRV---GeSRdaKDIYLGTFDTEEEAAEAYDIAAIELRGA 288 9****************998...443347*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MTENFPDPME VPNPLGNLNP KPVLPSLNDD DGSEATVAAE KDAGDFVLET PSEKLTQEPS 60 EEASKSHEAE AWDAVLVDDI AGENKSNALE EAPEKNSGEC RPGLIVPEKK EERKVGTLVA 120 AAMKKYAAPR SSNYHGVTKL KWSGKFEAHL WDNTSHVEGR KRKGKHGSYE SEEQAARSHD 180 LAALKYFGPG PNXKLNFPIS EYEKEMEIMT KMSHEEFVAY VRRQSSCFSR GASMYRGVTR 240 RRKDGKWQAR IGRVGESRDA KDIYLGTFDT EEEAAEAYDI AAIELRGAHA VTNFDISNYY 300 EGGTLKRLDD TCKQET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 3e-58 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr00691.1 |