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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr00521.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 250aa MW: 28427.5 Da PI: 8.9084 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.9 | 2e-31 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrng+lKKA+ELSvLCdae+a+iifss+gklye+ Dr00521.1 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEIALIIFSSRGKLYEFG 58 79**********************************************95 PP | |||||||
2 | K-box | 97 | 2.9e-32 | 99 | 176 | 9 | 86 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkeke 86 +++++++++qe++kLk++ e+Lqr+qRhllGedL++Ls+keLqqLe+qLe++l + R++K++++l+q+eel+kk +e Dr00521.1 99 IANRDSQNWCQEVSKLKAKFESLQRSQRHLLGEDLGPLSVKELQQLERQLETALAQARQRKTQIMLDQMEELRKKLQE 176 567889*********************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEIALIIFSS RGKLYEFGSA 60 GALSIGVLPL WRQDELILVT SNTLERYKRC CYNAHDLTIA NRDSQNWCQE VSKLKAKFES 120 LQRSQRHLLG EDLGPLSVKE LQQLERQLET ALAQARQRKT QIMLDQMEEL RKKLQEEGVS 180 FSAIQGSWEG DISTALPNHG FTLHPHSSSM DAPILQIGYH PFVPPEAAAM PRNSNTTNHG 240 ENNFMHGWIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 5e-84 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr00521.1 |