PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr00521.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MIKC_MADS
Protein Properties Length: 250aa    MW: 28427.5 Da    PI: 8.9084
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr00521.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF98.92e-31958150
               S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
     SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
               krienk+nrqvtfskRrng+lKKA+ELSvLCdae+a+iifss+gklye+ 
  Dr00521.1  9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEIALIIFSSRGKLYEFG 58
               79**********************************************95 PP

2K-box972.9e-3299176986
      K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkeke 86 
                 +++++++++qe++kLk++ e+Lqr+qRhllGedL++Ls+keLqqLe+qLe++l + R++K++++l+q+eel+kk +e
  Dr00521.1  99 IANRDSQNWCQEVSKLKAKFESLQRSQRHLLGEDLGPLSVKELQQLERQLETALAQARQRKTQIMLDQMEELRKKLQE 176
                567889*********************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEIALIIFSS RGKLYEFGSA  60
GALSIGVLPL WRQDELILVT SNTLERYKRC CYNAHDLTIA NRDSQNWCQE VSKLKAKFES  120
LQRSQRHLLG EDLGPLSVKE LQQLERQLET ALAQARQRKT QIMLDQMEEL RKKLQEEGVS  180
FSAIQGSWEG DISTALPNHG FTLHPHSSSM DAPILQIGYH PFVPPEAAAM PRNSNTTNHG  240
ENNFMHGWIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.15e-84MIKC_MADS family protein