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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr00162.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | AP2 | ||||||||
Protein Properties | Length: 502aa MW: 56549 Da PI: 10.2165 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 40.2 | 8.5e-13 | 64 | 120 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ ++k+ g ++ +e Aa+a++ a++k++g Dr00162.1 64 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 120 57*******************6666777775555599******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 502 aa Download sequence |
MAAASSSSLK GEATAVELSE GRKTPAAADQ LSVGGMKKAR RERVCTAKER ISRMPPCAAG 60 KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQGA YDDEEAAARA YDLAALKYWG 120 AGTLINFPVS DYSRDLEEMQ MVSKEDYLVS LRRKSSAFSR GFPKYRGIAR QPQNNRWETP 180 FSQMFGNEYL NNLNCSTSKD PSLEGKYTSP FCMERKIDLT SYIRWWVPKK ARQSDSANNT 240 EEINRELRLI EGPIHPTEPY QFPVLGPAQK GKSKIRTISA CNIISQSAAF KNFENKLKES 300 QEGSCSKQME NQKSKAILFS DDGIDRSGAA LDLREFPVQR APYSLAPLLS APLRTNWNPV 360 DPVHDPVFWA SLVPPTAQSL PTSEYPIMIL IDGTFSHHGN SKGVLKLDKV RHDRVHGTEK 420 IRPKAILFKN RDLLLHRENI DESKDQAYPH LLRHQGTSRR HKGSGASTRS STLEANLKEK 480 GVLSSFFRSS VISSMLYPSM RG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41710.1 | 1e-102 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr00162.1 |