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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020699194.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 242aa MW: 27796.8 Da PI: 9.7423 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 100.2 | 8e-32 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gklye+ XP_020699194.1 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 58 79**********************************************95 PP | |||||||
2 | K-box | 109.1 | 4.9e-36 | 77 | 171 | 5 | 99 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + +++ +++++s++qe++kLk++ e+Lqr++RhllGedL++L++keLqqLe+qLe +l++ R++K++++l+q+eel+kke++l e+nk+L++kle XP_020699194.1 77 QATNTIDRETQSWYQEVSKLKAKFESLQRSHRHLLGEDLGPLNVKELQQLERQLEAALSQARQRKTQIMLDQMEELRKKERQLGEINKQLKMKLE 171 556677899************************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFGSA 60 GTCKTLERYQ RSSFSSQATN TIDRETQSWY QEVSKLKAKF ESLQRSHRHL LGEDLGPLNV 120 KELQQLERQL EAALSQARQR KTQIMLDQME ELRKKERQLG EINKQLKMKL EAGSGSLRLI 180 QGSWESDAVV EGNAFQMNPY QSSGMECEPT LHIGYHQFVP PETVIPRTPG VENNNFMLGW 240 ML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 9e-87 | MIKC_MADS family protein |