PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz15g08240.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

SBP

Protein Properties

Length: 1100aa MW: 117703 Da PI: 6.9126

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz15g08240.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	89.8	3e-28	70	143	2	75
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrk 75 C+v+gC++ l++ k y++rh++Ce+h ++ + +v+++ rfCqqC++f ++ fD ++rsCr rL++hn+rrrk Cz15g08240.t1 70 CKVKGCQTLLQSEKPYYQRHQICEHHLRSLSLVVEDMVSRFCQQCGKFEPVTAFDGNRRSCRARLQEHNKRRRK 143 *************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 1100 aa Download sequence
MDEQSSELAL TEGASKESDG FCRGPKRLLT LPDISATQGK GDKVDPSQPP VLLQKTATLE 60 LDACGEPIYC KVKGCQTLLQ SEKPYYQRHQ ICEHHLRSLS LVVEDMVSRF CQQCGKFEPV 120 TAFDGNRRSC RARLQEHNKR RRKLGLSLST VKRKVKGPQM KRGMLPCTAV DAEAAGSLLV 180 SSGNLQAAAK RSDDEHRAAA AARVSDCMQF CHNWPSAYGV QLPVEQTDHT AVDSQGSPME 240 VSSLSGEPRA VLSNSLSRNH SGYTSAHQTS PIQPEDVEDH NAVQQGPKCP MADGLCPLPT 300 GKLTSKPAQG ATQSVASGRA NRQHVVTTSA APLKRQSSRN LVPNAEHNPA VRSDNMCESN 360 QGSKSTSTSN SAAPHDLYLP AATAGACIPC RHEATKYVNS KQSTLAMPPA PALTPPLQMT 420 SSSSNSPDIS AQDGTASGIS QATVNNQGYC NSAAAVVPDY QAGSSMHSST HMDTVNAAAS 480 IQHTTWQSTA LQPTHSANSL AAASHNTAML HVTRHLDAVR AARLLVTSTA SITSQPASAA 540 PLLQSLGKDN FLHLKNSLKV STAANRLLVE LCCFLTAICC VPSSTCIMSR YMQQPASLLV 600 RLHHDVHSTI AAVAAADVTT NVCCHGLQAM LSGHAKTLEP SLTVPAAVKA RLAAEMLSVL 660 LLEHTEQQPT APTWSAHPTA AMDAASAQCM QMHDPEQQHL PGHNPLLQSS ASLYQQELNL 720 QGSVPLNNPL YMQPLSPVRA ALQGQAMQPM QQANFGALEH LMPALAQPPA ALQQTEHCQQ 780 QQQHHLLTSD VVWPTYMLHE DFPFDVDPLL DTEVADDSMD VETALSLHAR SSMETAAASS 840 MTSILQYVPQ GASVQELQEI QRLLALDPPE TSAGCASHST QQAVGLELHV QAGAASPLLL 900 EASLTKSHSA NDSSNSRYEC WEPTLSGCSR PTCYLDLDLP KQRFLTDQRP HRATYAASSM 960 DCTVQQLAAK CNGALTDEPR KNSISDVLLQ QAEYGTDGAE CPRDCNTSYQ TMQPPDIGVA 1020 SEVSHGAWKQ HGPPQPDQSR AISSSNKRPW HACVPVLSHG RPLQRSKSAY AAALPDCKAA 1080 GLASFDVAKQ LIAGKGEYR*

Sequence ? help Back to Top

Protein Sequence Length: 1100 aa Download sequence

MDEQSSELAL TEGASKESDG FCRGPKRLLT LPDISATQGK GDKVDPSQPP VLLQKTATLE  60
LDACGEPIYC KVKGCQTLLQ SEKPYYQRHQ ICEHHLRSLS LVVEDMVSRF CQQCGKFEPV  120
TAFDGNRRSC RARLQEHNKR RRKLGLSLST VKRKVKGPQM KRGMLPCTAV DAEAAGSLLV  180
SSGNLQAAAK RSDDEHRAAA AARVSDCMQF CHNWPSAYGV QLPVEQTDHT AVDSQGSPME  240
VSSLSGEPRA VLSNSLSRNH SGYTSAHQTS PIQPEDVEDH NAVQQGPKCP MADGLCPLPT  300
GKLTSKPAQG ATQSVASGRA NRQHVVTTSA APLKRQSSRN LVPNAEHNPA VRSDNMCESN  360
QGSKSTSTSN SAAPHDLYLP AATAGACIPC RHEATKYVNS KQSTLAMPPA PALTPPLQMT  420
SSSSNSPDIS AQDGTASGIS QATVNNQGYC NSAAAVVPDY QAGSSMHSST HMDTVNAAAS  480
IQHTTWQSTA LQPTHSANSL AAASHNTAML HVTRHLDAVR AARLLVTSTA SITSQPASAA  540
PLLQSLGKDN FLHLKNSLKV STAANRLLVE LCCFLTAICC VPSSTCIMSR YMQQPASLLV  600
RLHHDVHSTI AAVAAADVTT NVCCHGLQAM LSGHAKTLEP SLTVPAAVKA RLAAEMLSVL  660
LLEHTEQQPT APTWSAHPTA AMDAASAQCM QMHDPEQQHL PGHNPLLQSS ASLYQQELNL  720
QGSVPLNNPL YMQPLSPVRA ALQGQAMQPM QQANFGALEH LMPALAQPPA ALQQTEHCQQ  780
QQQHHLLTSD VVWPTYMLHE DFPFDVDPLL DTEVADDSMD VETALSLHAR SSMETAAASS  840
MTSILQYVPQ GASVQELQEI QRLLALDPPE TSAGCASHST QQAVGLELHV QAGAASPLLL  900
EASLTKSHSA NDSSNSRYEC WEPTLSGCSR PTCYLDLDLP KQRFLTDQRP HRATYAASSM  960
DCTVQQLAAK CNGALTDEPR KNSISDVLLQ QAEYGTDGAE CPRDCNTSYQ TMQPPDIGVA  1020
SEVSHGAWKQ HGPPQPDQSR AISSSNKRPW HACVPVLSHG RPLQRSKSAY AAALPDCKAA  1080
GLASFDVAKQ LIAGKGEYR*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	144	RRSCRARLQEHNKRRRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27370.3	6e-19	SBP family protein