PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz14g22200.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

C2H2

Protein Properties

Length: 687aa MW: 69905.5 Da PI: 11.7602

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz14g22200.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.00029	56	79	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 + C Cg++ ++++++k+H+ t H Cz14g22200.t1 56 FFCAECGEVLTSRDEFKTHQATaH 79 67******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 687 aa Download sequence
MSHPEAVQVG RLGRRRQSPR RTSESEQAKR AAAGARPAAD HNSADSLAAP IQRGLFFCAE 60 CGEVLTSRDE FKTHQATAHG ASNFCDSDSD DDYEEEQEEE VTQPGGSAAS PSHHAPAAAS 120 RGAASPQALT RAVNGTPVKL GQGPKRRRFR RRHNGVLPTD ALPVYRPVTA VPPAQQPTQT 180 PHDRAGHLAT AATACTIRPQ SPLSPAAASA VKAAVTELWV PKRRIMPGAN GARVVLLQRP 240 HKSEDPASAT ASDSNMPSQQ SNKPRIPTLA TASAAPSTRE RHTGMAATAN TPGAGSFLDG 300 DQGGPRRKRG ARGGRRRNRT PGGTLTDVAD HLQQPQGSRP AQAAPLGVAG NPSNPPAVPA 360 MPIKPMLTTL NPASMHKAPA AAAASAHPSH SCRRYGILGA VVGSDDHPAS TTTTSTALAV 420 TAAPAADRCP ASIQADMLKL SLNAAGQQHS SVRHQPAQSG QPSAVGLNHD SSSSSSAGAG 480 RGHGRGGRGV VQVQWVPRAA AKQLSAAPPH VGVPVTNLHP GSNGTEVGMA RNAAPAVTGN 540 STQSRTSDID ATASNQRGVQ VGGGRHADAS NGLRMQKTWR PRKGPRGAGQ GNISNGNFGP 600 PLQQGSRVQL VAQDAIAAAG GGGNGNTSAA VDGSAGVGML HGRPAGRGGS VQARGRGGGR 660 GRNGMPSTTG PGRGMPERGL AAEGIV*

Sequence ? help Back to Top

Protein Sequence Length: 687 aa Download sequence

MSHPEAVQVG RLGRRRQSPR RTSESEQAKR AAAGARPAAD HNSADSLAAP IQRGLFFCAE  60
CGEVLTSRDE FKTHQATAHG ASNFCDSDSD DDYEEEQEEE VTQPGGSAAS PSHHAPAAAS  120
RGAASPQALT RAVNGTPVKL GQGPKRRRFR RRHNGVLPTD ALPVYRPVTA VPPAQQPTQT  180
PHDRAGHLAT AATACTIRPQ SPLSPAAASA VKAAVTELWV PKRRIMPGAN GARVVLLQRP  240
HKSEDPASAT ASDSNMPSQQ SNKPRIPTLA TASAAPSTRE RHTGMAATAN TPGAGSFLDG  300
DQGGPRRKRG ARGGRRRNRT PGGTLTDVAD HLQQPQGSRP AQAAPLGVAG NPSNPPAVPA  360
MPIKPMLTTL NPASMHKAPA AAAASAHPSH SCRRYGILGA VVGSDDHPAS TTTTSTALAV  420
TAAPAADRCP ASIQADMLKL SLNAAGQQHS SVRHQPAQSG QPSAVGLNHD SSSSSSAGAG  480
RGHGRGGRGV VQVQWVPRAA AKQLSAAPPH VGVPVTNLHP GSNGTEVGMA RNAAPAVTGN  540
STQSRTSDID ATASNQRGVQ VGGGRHADAS NGLRMQKTWR PRKGPRGAGQ GNISNGNFGP  600
PLQQGSRVQL VAQDAIAAAG GGGNGNTSAA VDGSAGVGML HGRPAGRGGS VQARGRGGGR  660
GRNGMPSTTG PGRGMPERGL AAEGIV*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	306	317	RRKRGARGGRRR