PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz14g02220.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

C2H2

Protein Properties

Length: 858aa MW: 94457 Da PI: 4.581

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz14g02220.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.1	0.00014	300	322	3	23
ETTTTEEESSHHHHHHHHHH..T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt..H 23 C C+k+F++ +L +H r+ H Cz14g02220.t1 300 CVVCDKRFRSAGQLANHERSkkH 322 99***************998666 PP
2	zf-C2H2	13.9	0.00016	830	852	3	23
ETTTTEEESSHHHHHHHHHH..T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt..H 23 C+ Cg +F+++ +L +Hi++ H Cz14g02220.t1 830 CSVCGVVFPTRNQLFKHIQSsgH 852 ******************87666 PP

Sequence ? help Back to Top
Protein Sequence Length: 858 aa Download sequence
MRCLYEVLGV ERDADDDAIK KAYRKQALIW HPDKNQHRLE EADKQFKDIS NAYEVLSDKH 60 ERAWYDSHRE QILRSGDHHQ AGGTGGFTPG QKPDDEIDLF QYFTSGCFQG FGDGPKGFYG 120 VYAELFDTLA DQELSAYEAD TARTGNNPPT YPGFGSSTSP AAEVYAFYSN WSSFATYKNF 180 AWADHYNPAA APNRQVRRRM EEENRKARRI ARREYMDNVR ELVAFVKKRD KRVAKFQAEE 240 AARRAEREAA ELERRAAEKY ERLRRAAEYE EPEWVTDTAQ DHGDVDDDGE SDAELDTLFC 300 VVCDKRFRSA GQLANHERSK KHLDALASLK QVLADEEQWI LEEGEAGVGR EGEDDVDARG 360 LESGGKNGVQ GAEGVPGPYA NDGASLGKKN KKKAKKHQQQ QSKAVESQQQ QQQQQQGVQL 420 LDAEADDDVT VDSSWSAKRQ KQKKKRAGMA AAVDEQHTAQ PGSQLNKGHS GPANQHKQQH 480 TQQAHQPSMD DQTSSVSEPS EHEQDESDVD EDALLARLVS SKARHQQDAN PAATGTAAAG 540 DGNDDAIDEE AEEASGSSAD DEEHCTDDDD DEEAMLARMV SGRQTSQQPK QRQRQQQQQQ 600 QHDSASLEDG GDQPGSVDAA TDDDSGDDVG GDDDSDDDDD DDDDDDDDDD GADDDDEDAL 660 LARLVSNRTS STSRQAPSGK ATNSKQQRRQ QQQTLEAGND SVDAMGVQQQ HQQQHRQQQD 720 TACNAPGSIN GLAHAVQDMH VNAAETQGLQ DRESSESSTM NGHADKKAPK SLRRDAQQSK 780 SSTAGTVSAA QDDGSDDEDA HGRTSSKKDK RKQKQEKKQK ADAAAAGLLC SVCGVVFPTR 840 NQLFKHIQSS GHAALKH*

Sequence ? help Back to Top

Protein Sequence Length: 858 aa Download sequence

MRCLYEVLGV ERDADDDAIK KAYRKQALIW HPDKNQHRLE EADKQFKDIS NAYEVLSDKH  60
ERAWYDSHRE QILRSGDHHQ AGGTGGFTPG QKPDDEIDLF QYFTSGCFQG FGDGPKGFYG  120
VYAELFDTLA DQELSAYEAD TARTGNNPPT YPGFGSSTSP AAEVYAFYSN WSSFATYKNF  180
AWADHYNPAA APNRQVRRRM EEENRKARRI ARREYMDNVR ELVAFVKKRD KRVAKFQAEE  240
AARRAEREAA ELERRAAEKY ERLRRAAEYE EPEWVTDTAQ DHGDVDDDGE SDAELDTLFC  300
VVCDKRFRSA GQLANHERSK KHLDALASLK QVLADEEQWI LEEGEAGVGR EGEDDVDARG  360
LESGGKNGVQ GAEGVPGPYA NDGASLGKKN KKKAKKHQQQ QSKAVESQQQ QQQQQQGVQL  420
LDAEADDDVT VDSSWSAKRQ KQKKKRAGMA AAVDEQHTAQ PGSQLNKGHS GPANQHKQQH  480
TQQAHQPSMD DQTSSVSEPS EHEQDESDVD EDALLARLVS SKARHQQDAN PAATGTAAAG  540
DGNDDAIDEE AEEASGSSAD DEEHCTDDDD DEEAMLARMV SGRQTSQQPK QRQRQQQQQQ  600
QHDSASLEDG GDQPGSVDAA TDDDSGDDVG GDDDSDDDDD DDDDDDDDDD GADDDDEDAL  660
LARLVSNRTS STSRQAPSGK ATNSKQQRRQ QQQTLEAGND SVDAMGVQQQ HQQQHRQQQD  720
TACNAPGSIN GLAHAVQDMH VNAAETQGLQ DRESSESSTM NGHADKKAPK SLRRDAQQSK  780
SSTAGTVSAA QDDGSDDEDA HGRTSSKKDK RKQKQEKKQK ADAAAAGLLC SVCGVVFPTR  840
NQLFKHIQSS GHAALKH*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	388	396	KKNKKKAKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74250.1	6e-60	C2H2 family protein