PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz13g18310.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

SBP

Protein Properties

Length: 1087aa MW: 115428 Da PI: 6.8385

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz13g18310.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	115	4.1e-36	26	100	1	75
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrk 75 +CqvegC +dls +keyh r+++Ce h k ++++g++qrfCqqC+rfh+ls+fD +krsCr+rL++hn+rrrk Cz13g18310.t1 26 TCQVEGCGEDLSGLKEYHIRYRICEEHLKIDFIIIDGKQQRFCQQCGRFHALSKFDSAKRSCRDRLQRHNARRRK 100 6*************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 1087 aa Download sequence
MQPRRTSERA AVKRYAVLKP KPNGPTCQVE GCGEDLSGLK EYHIRYRICE EHLKIDFIII 60 DGKQQRFCQQ CGRFHALSKF DSAKRSCRDR LQRHNARRRK GVEISVSPTV AAAAVQSTGN 120 RGNKAPKTAA APKSAAAQDS NQKKVARRKV AKDAAAALTS SPAVAHPANG KQPDSHSSEE 180 ASSATGEVTK PSSTLKHGET ALSSGYGLQP LPATGNLPRN AYSTAAGALV SCGLEENGLL 240 DLQCISQCMD MDHDALNGSH TEEGAEAQNG ILQVTDLELL QQVYEEFALP DVNQHDNLAP 300 PPATQQMHVH SAPSLGMHHQ QPLSAPSFQP PQNGYGSAMT LASTGPIINH NGMGAPLVMQ 360 PQHHGLNGNN TNSWDAVSTP APMPGFSYTM HENQVKQNMG LSAPVPDELL AGLGDSLQPM 420 PAVHTSNSSH AQAMQQPAHV YNHHYQMAGA HDMTVGGGGL NTMSSSSPYH APVMSHSHNG 480 VRPAVVPDST MSHIANNISA VGSLAQARAL LSAPAAPGTA YSTLERLVSL SIKLYDATPS 540 QLPLQLREDL LAVVAGGLLP ESFLRPGCLQ LTLDVYQAVT AAAAPAPGGP VVSLRAMDVA 600 KQLIGDGATF WSSQSRLQVQ LGSTTATARH GQVSQAAGSC STASPYIESV NPLCITTADD 660 TGSQWIRLDC CSMSDGPLHL TVRGQGQYYE IDHDSVDSAP HARSSDRATI SFLLAEQPRP 720 GVLRVEVTGS ITNTHATKCL LVLPDKAMVP EVCSLETRMA AVSCSVDDVI ADLGRVLELK 780 WWLDHQYKAS KEASDVDDQP QVPLRSYSPD ELRSCVMAAR QLMCFATRQG WPATVSALVP 840 VAAIGCATAQ GVIAGAVYDS SGPIGLLHLA VASQAQPMVE YWLKWGAQHG VDWHLDGCTD 900 YAVTPLHLAA VLDDKGVMAD TLTDSLAGAV EAWTTLRTSD NMTPSQMAVA SGHYLTDHLI 960 KRKAAALLPD HIAAATAEDA DMLESGMHSA VCGGGKDHYE PVKPGKGKRV GEVSSVCKQC 1020 GLPLSYHPGR HGAAQHKRHV HIPTEYPDVS PQLLSWKALV LLMSAVMLVG MGAHAFVQWA 1080 SDRINV*

Sequence ? help Back to Top

Protein Sequence Length: 1087 aa Download sequence

MQPRRTSERA AVKRYAVLKP KPNGPTCQVE GCGEDLSGLK EYHIRYRICE EHLKIDFIII  60
DGKQQRFCQQ CGRFHALSKF DSAKRSCRDR LQRHNARRRK GVEISVSPTV AAAAVQSTGN  120
RGNKAPKTAA APKSAAAQDS NQKKVARRKV AKDAAAALTS SPAVAHPANG KQPDSHSSEE  180
ASSATGEVTK PSSTLKHGET ALSSGYGLQP LPATGNLPRN AYSTAAGALV SCGLEENGLL  240
DLQCISQCMD MDHDALNGSH TEEGAEAQNG ILQVTDLELL QQVYEEFALP DVNQHDNLAP  300
PPATQQMHVH SAPSLGMHHQ QPLSAPSFQP PQNGYGSAMT LASTGPIINH NGMGAPLVMQ  360
PQHHGLNGNN TNSWDAVSTP APMPGFSYTM HENQVKQNMG LSAPVPDELL AGLGDSLQPM  420
PAVHTSNSSH AQAMQQPAHV YNHHYQMAGA HDMTVGGGGL NTMSSSSPYH APVMSHSHNG  480
VRPAVVPDST MSHIANNISA VGSLAQARAL LSAPAAPGTA YSTLERLVSL SIKLYDATPS  540
QLPLQLREDL LAVVAGGLLP ESFLRPGCLQ LTLDVYQAVT AAAAPAPGGP VVSLRAMDVA  600
KQLIGDGATF WSSQSRLQVQ LGSTTATARH GQVSQAAGSC STASPYIESV NPLCITTADD  660
TGSQWIRLDC CSMSDGPLHL TVRGQGQYYE IDHDSVDSAP HARSSDRATI SFLLAEQPRP  720
GVLRVEVTGS ITNTHATKCL LVLPDKAMVP EVCSLETRMA AVSCSVDDVI ADLGRVLELK  780
WWLDHQYKAS KEASDVDDQP QVPLRSYSPD ELRSCVMAAR QLMCFATRQG WPATVSALVP  840
VAAIGCATAQ GVIAGAVYDS SGPIGLLHLA VASQAQPMVE YWLKWGAQHG VDWHLDGCTD  900
YAVTPLHLAA VLDDKGVMAD TLTDSLAGAV EAWTTLRTSD NMTPSQMAVA SGHYLTDHLI  960
KRKAAALLPD HIAAATAEDA DMLESGMHSA VCGGGKDHYE PVKPGKGKRV GEVSSVCKQC  1020
GLPLSYHPGR HGAAQHKRHV HIPTEYPDVS PQLLSWKALV LLMSAVMLVG MGAHAFVQWA  1080
SDRINV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	3e-27	SBP family protein