PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz12g11120.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

ERF

Protein Properties

Length: 893aa MW: 95575.2 Da PI: 7.014

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz12g11120.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	39.2	1.7e-12	111	159	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 ++GV+wd+k+ rW+++ + g ++k++ g+f ae+Aa+a+++ +l+g Cz12g11120.t1 111 NFRGVFWDRKNCRWRSQ---V---GfQNKKIFMGYFNDAEDAARAYDRKLVELHG 159 58*************...5...5567*******************999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 893 aa Download sequence
MSPAIGSSAQ ETEERDAAES MVAAQYLLSL ATSEPRAEVA TRRKRQSQDH TASTECRDNS 60 EDVTTTPRKS TRSSISGGKA RSTRAAATVR INFAELTAPS SAVDAPDGKT NFRGVFWDRK 120 NCRWRSQVGF QNKKIFMGYF NDAEDAARAY DRKLVELHGS TAKTNFPIHE YLDEIVGHDA 180 AVASKDVDMV QHPEAAGTSY RVMESPAQQA GLKQKRPMPG LREPSGEHMR SHPGPYDQNT 240 HQDRDHLFQN GHLRAGPHGY DPMPPAMRGR RVMLSRNSSG VDAVRAPPGV DAVRAPPGVD 300 AVRAPYTPAF RPAGHYDAMG VYPELYDDAS MQQQAPVGRA LHRLDSGAGG SSARRHRDDR 360 QQYADDGFAH GWQGTDAMTR NGMHGCIEAV KEDPYQRSLG GLTRGHSMGR YASGARQQLD 420 ADGMWPTSSE GWMGSAGPAD RFDRHQQYGY PPHADMGTDH AGYEYAQGGA GVSRQQVGMD 480 LQRPSDRQQG WYARVTGPCD VQHGARTGGI DGAAVVGADE QLTAGAQDVS RSLLPALRRR 540 INPSANKNKG RIAADDLGMD SSLTGFMGAP AAKASTAEAG GDSTGSPDTR ASKSPSATVS 600 TVPRGSIISS MADSIGQQTT GGEAVTTGFL GAAATAADNG QMLPQPLQPM DAASMFEALK 660 RLAHKVAASD ADHELVTSPE YHGDLEARVH DSSLRRTSKR AASLEADPCG HIASKRQSCG 720 SSIRRWGSGV SCLTEDLPDI EQVITQQQQP KPAASAETNN QQGQAGQHVP PAVPSEPSSP 780 MFQRLHILQH ECVEVRMLEP QTVPMHDGPA NVEQILKERV LPIASEAVMK LLRQQQVSSV 840 AASAKLSPGI EAPAKSMLQG SAHDGMPGPP CQPPCVVFLA PVLMPYLVNG QQ*

Sequence ? help Back to Top

Protein Sequence Length: 893 aa Download sequence

MSPAIGSSAQ ETEERDAAES MVAAQYLLSL ATSEPRAEVA TRRKRQSQDH TASTECRDNS  60
EDVTTTPRKS TRSSISGGKA RSTRAAATVR INFAELTAPS SAVDAPDGKT NFRGVFWDRK  120
NCRWRSQVGF QNKKIFMGYF NDAEDAARAY DRKLVELHGS TAKTNFPIHE YLDEIVGHDA  180
AVASKDVDMV QHPEAAGTSY RVMESPAQQA GLKQKRPMPG LREPSGEHMR SHPGPYDQNT  240
HQDRDHLFQN GHLRAGPHGY DPMPPAMRGR RVMLSRNSSG VDAVRAPPGV DAVRAPPGVD  300
AVRAPYTPAF RPAGHYDAMG VYPELYDDAS MQQQAPVGRA LHRLDSGAGG SSARRHRDDR  360
QQYADDGFAH GWQGTDAMTR NGMHGCIEAV KEDPYQRSLG GLTRGHSMGR YASGARQQLD  420
ADGMWPTSSE GWMGSAGPAD RFDRHQQYGY PPHADMGTDH AGYEYAQGGA GVSRQQVGMD  480
LQRPSDRQQG WYARVTGPCD VQHGARTGGI DGAAVVGADE QLTAGAQDVS RSLLPALRRR  540
INPSANKNKG RIAADDLGMD SSLTGFMGAP AAKASTAEAG GDSTGSPDTR ASKSPSATVS  600
TVPRGSIISS MADSIGQQTT GGEAVTTGFL GAAATAADNG QMLPQPLQPM DAASMFEALK  660
RLAHKVAASD ADHELVTSPE YHGDLEARVH DSSLRRTSKR AASLEADPCG HIASKRQSCG  720
SSIRRWGSGV SCLTEDLPDI EQVITQQQQP KPAASAETNN QQGQAGQHVP PAVPSEPSSP  780
MFQRLHILQH ECVEVRMLEP QTVPMHDGPA NVEQILKERV LPIASEAVMK LLRQQQVSSV  840
AASAKLSPGI EAPAKSMLQG SAHDGMPGPP CQPPCVVFLA PVLMPYLVNG QQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G39250.1	2e-08	AP2 family protein