PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz11g22260.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family Trihelix
Protein Properties Length: 426aa    MW: 46294.5 Da    PI: 7.2884
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz11g22260.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix40.95.5e-1371142276
       trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 
                    Wt +e l+Li++ ++ e++++++   k+lWe+ s+++ e+++er+p+  ++kw n+ + y++ike+++ r+ e s
  Cz11g22260.t1  71 WTLDEELTLIALFKDFEKKYETR---KQLWEALSQALGEKQYERKPISLEQKWGNMLQTYRNIKEHDRVRSREGS 142
                    *******************9988...99***************************************99866555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    
MDQAQLGVGG LDAVVAHHQD HSVVPISMPL VPGVPSTSAD SQPKLWSDNL LQTEPSSSAG  60
NKPKRMRSAN WTLDEELTLI ALFKDFEKKY ETRKQLWEAL SQALGEKQYE RKPISLEQKW  120
GNMLQTYRNI KEHDRVRSRE GSFYNLDAAD RRTLYHQWKV NSLEQSAFDA MDEFLKDRAE  180
AMRSMDRTIT QHDKTPLHFV PVDLTGASAL PALANAATLA AAATLTAGLN HPAAGPVSTP  240
MQLAVGLPTM AVAGSMPGSI SLPLAGLPNV STVALAPQLS LTAAATAAPS HASQRAPAEQ  300
QQHQQQQPQQ PQQQAQQQHQ QALQQAYSHI QQQQQQQLPQ PSPITALQVM ASLGHTLLLK  360
MIDLEKIIAR TPVSDVERCR ANLALLNDFV RSLEALKHHQ LAMTVPLVSA TAAAAPPSAP  420
SSSQQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25990.13e-09Trihelix family protein