PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz09g29010.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

SBP

Protein Properties

Length: 1868aa MW: 200997 Da PI: 5.9833

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz09g29010.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	105.9	2.9e-33	83	158	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 C v+gC++dl+ k y++r+++Ce h +a ++lv+g rfCqqC+rfh+++efD +krsCr rL++hn+rrrk++ Cz09g29010.t1 83 CMVDGCNKDLTGEKAYYKRYRICEEHLRARSMLVDGNVSRFCQQCGRFHSVDEFDGNKRSCRARLKEHNKRRRKQA 158 **************************************************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 1868 aa Download sequence
MEDNYSGAFE GDVPWDINKY HWDPHRLTAT ARDTGQPAEQ PAVFAAGRQM SSDGGRDSSD 60 AAGGILPTLS LPANLKGKGN ILCMVDGCNK DLTGEKAYYK RYRICEEHLR ARSMLVDGNV 120 SRFCQQCGRF HSVDEFDGNK RSCRARLKEH NKRRRKQAAA TDIAGLQTDA SSIQTPASNE 180 TGQQPTALAH PMQQSMSSVR TSLRSASSYP PSTQLPSATH SIRGGPLHSA RQTAENTAAR 240 QQWMGSMLVP DPDVVGVQPG WVPYRASDDQ GIVATAGPTS SSADYRHMPE DMPADEESNK 300 LQDSFMLGQA GQQQGAVADT LAAPVTGRIH AQQDVANRFE AVRQALLSGS LNPEATTSTS 360 GGAAAQSGGK PTHPAAAASM DHSTRMQLLD ELISMMVHGL PQGQQLLHDK LHTQQQWQLQ 420 PHLREQRQQQ RQPDVQHGHQ LYAMQQLPSP QPSLNAAVAL SPSSPAAAHW KHVQNASTSL 480 QPSAAVEDWR QPYEQLHAEL LTSTSTPSTY LPDSSSLAGA SRSPHGTSAQ WNAASHQAIM 540 TALQQSAYDL GLHDQQQLHT TFTVRGQSSH HAGDSQSELA QLSELPSDRP ITLRLRFKRD 600 GNDAYGVAPA AEIQPAQNAA YQTVVSQAAM HDINRQPSRA IFQQQEDMLG VADHADLNSL 660 SRWQQYQSPT QREHPDTVSD IQHPPEDTAS PAASAAPWLL PVGSLVSHDA TDPTPLPYPG 720 AADLHVGEGG SSKAGSSRAA ASPLQDSSYA LAVQLAAGGA SSALYQSDEA VLRCALKLHQ 780 TTPELLPPDI QQQLQVLLSG ANATLLQGFI RPGCTQLVLD ILQQRPYGAT IEQQQQLQHV 840 LSWENLKLIL DQGVGSIRQH TALLQVENTA VFVRDGVMKG HWQPELSSIP GIHTITPCCV 900 SSATPDNKIT TAGKSLQIPG VKVHIRCQGR YLSSCHDDAI LTDASTHLPS MIIHIPSDDL 960 PSNGLAFIEL EGPDHLLSDP VPLLVVDDDV IAEELNEVLQ RHMQSHSGTG DDGEGSSSTD 1020 ARVVVLGADA SEDLEAGWSD VDTDDDELVG LVDVDDDEEE GEHWKGPEVR LMSSHPLLQD 1080 DYTGSMMYTA GHLLTHCVEV GLQWTATRVL HIMLQQGCRF TDIVHVLADM SGMSLLHHAV 1140 RSLDLDMLQT VLKWGEMHQH VWPWNDCGMV GVTPLHLAAV AADDGNMAEY VLKTSIGACL 1200 LWLTAATSDG FTPAALALLE SRTHLNTLAL HGLYSMLPAQ LAVSVLARCE DAMLMNNTQM 1260 SMPLHPAIAV TNSFNGYSRG GAAVEDTGME VTADQQRHHY GVLQDTGVAG WALEGVNDTP 1320 GLTGSRLGTS TPDADYTSPY ATDSETASSG YRDTRSITDD TLLVPAIQMG VNMVHTTHGN 1380 EQEDLRGDDA EHSHYSNDVP VPQVGRFQRF SEDCALAGPQ IPVYTRLAHA GSGIVRSPRR 1440 ASFSGSSSNS PGSRASSLWS SRSGISIGSS SSNVSSSILV ATRSGFSMGG SFSSGRASLR 1500 TTRSGISTSG TSSTRTSRSP RTSRESVVGS SGSRFLISTF GGLDRLVEVT GSGECSTPTT 1560 PDDAAKLGHF REPVETVPSS TLHCMIVALC WPLIGLLLLS VVCAVVISQW PGLYSSGALH 1620 AVIAGMIAMA AIGASPNRVL SRLSPMAHLP GSWSHVTSLV FSNAALEQSF IQSFSQSQLT 1680 KDFIMAAVML LVQLLLLPWL PVLLPADLQL WGSSMQQYQW LGVAGTAVSL LLLAVRRSWY 1740 LQSRDAMLTL MQGLLLLQLH SDAGLQHSST ALVLVITAMC AVAMHGFRTR LPWLLVLLLW 1800 DCVAVCRLIT PSDNSSSWLS GRLAYLLLPL LVLPRAYWLE LSARRQYFQR IVGVEQAGST 1860 STHAHVD*

Sequence ? help Back to Top

Protein Sequence Length: 1868 aa Download sequence

MEDNYSGAFE GDVPWDINKY HWDPHRLTAT ARDTGQPAEQ PAVFAAGRQM SSDGGRDSSD  60
AAGGILPTLS LPANLKGKGN ILCMVDGCNK DLTGEKAYYK RYRICEEHLR ARSMLVDGNV  120
SRFCQQCGRF HSVDEFDGNK RSCRARLKEH NKRRRKQAAA TDIAGLQTDA SSIQTPASNE  180
TGQQPTALAH PMQQSMSSVR TSLRSASSYP PSTQLPSATH SIRGGPLHSA RQTAENTAAR  240
QQWMGSMLVP DPDVVGVQPG WVPYRASDDQ GIVATAGPTS SSADYRHMPE DMPADEESNK  300
LQDSFMLGQA GQQQGAVADT LAAPVTGRIH AQQDVANRFE AVRQALLSGS LNPEATTSTS  360
GGAAAQSGGK PTHPAAAASM DHSTRMQLLD ELISMMVHGL PQGQQLLHDK LHTQQQWQLQ  420
PHLREQRQQQ RQPDVQHGHQ LYAMQQLPSP QPSLNAAVAL SPSSPAAAHW KHVQNASTSL  480
QPSAAVEDWR QPYEQLHAEL LTSTSTPSTY LPDSSSLAGA SRSPHGTSAQ WNAASHQAIM  540
TALQQSAYDL GLHDQQQLHT TFTVRGQSSH HAGDSQSELA QLSELPSDRP ITLRLRFKRD  600
GNDAYGVAPA AEIQPAQNAA YQTVVSQAAM HDINRQPSRA IFQQQEDMLG VADHADLNSL  660
SRWQQYQSPT QREHPDTVSD IQHPPEDTAS PAASAAPWLL PVGSLVSHDA TDPTPLPYPG  720
AADLHVGEGG SSKAGSSRAA ASPLQDSSYA LAVQLAAGGA SSALYQSDEA VLRCALKLHQ  780
TTPELLPPDI QQQLQVLLSG ANATLLQGFI RPGCTQLVLD ILQQRPYGAT IEQQQQLQHV  840
LSWENLKLIL DQGVGSIRQH TALLQVENTA VFVRDGVMKG HWQPELSSIP GIHTITPCCV  900
SSATPDNKIT TAGKSLQIPG VKVHIRCQGR YLSSCHDDAI LTDASTHLPS MIIHIPSDDL  960
PSNGLAFIEL EGPDHLLSDP VPLLVVDDDV IAEELNEVLQ RHMQSHSGTG DDGEGSSSTD  1020
ARVVVLGADA SEDLEAGWSD VDTDDDELVG LVDVDDDEEE GEHWKGPEVR LMSSHPLLQD  1080
DYTGSMMYTA GHLLTHCVEV GLQWTATRVL HIMLQQGCRF TDIVHVLADM SGMSLLHHAV  1140
RSLDLDMLQT VLKWGEMHQH VWPWNDCGMV GVTPLHLAAV AADDGNMAEY VLKTSIGACL  1200
LWLTAATSDG FTPAALALLE SRTHLNTLAL HGLYSMLPAQ LAVSVLARCE DAMLMNNTQM  1260
SMPLHPAIAV TNSFNGYSRG GAAVEDTGME VTADQQRHHY GVLQDTGVAG WALEGVNDTP  1320
GLTGSRLGTS TPDADYTSPY ATDSETASSG YRDTRSITDD TLLVPAIQMG VNMVHTTHGN  1380
EQEDLRGDDA EHSHYSNDVP VPQVGRFQRF SEDCALAGPQ IPVYTRLAHA GSGIVRSPRR  1440
ASFSGSSSNS PGSRASSLWS SRSGISIGSS SSNVSSSILV ATRSGFSMGG SFSSGRASLR  1500
TTRSGISTSG TSSTRTSRSP RTSRESVVGS SGSRFLISTF GGLDRLVEVT GSGECSTPTT  1560
PDDAAKLGHF REPVETVPSS TLHCMIVALC WPLIGLLLLS VVCAVVISQW PGLYSSGALH  1620
AVIAGMIAMA AIGASPNRVL SRLSPMAHLP GSWSHVTSLV FSNAALEQSF IQSFSQSQLT  1680
KDFIMAAVML LVQLLLLPWL PVLLPADLQL WGSSMQQYQW LGVAGTAVSL LLLAVRRSWY  1740
LQSRDAMLTL MQGLLLLQLH SDAGLQHSST ALVLVITAMC AVAMHGFRTR LPWLLVLLLW  1800
DCVAVCRLIT PSDNSSSWLS GRLAYLLLPL LVLPRAYWLE LSARRQYFQR IVGVEQAGST  1860
STHAHVD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15270.1	3e-24	SBP family protein