PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz07g32220.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

SBP

Protein Properties

Length: 1194aa MW: 125136 Da PI: 6.7665

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz07g32220.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	111.3	6.1e-35	354	431	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv+gC +dl+ +k+yh+r+++C+vh + p+v+ +g+ qrfCqqC+rfh+ls fD +++sCr++L+khn+rrr++++ Cz07g32220.t1 354 ICQVPGCGKDLTWLKDYHQRYRICDVHIRLPQVMKDGRLQRFCQQCGRFHDLSAFDGNRKSCREQLQKHNARRRRRAQ 431 5************************************************************************99865 PP

Sequence ? help Back to Top
Protein Sequence Length: 1194 aa Download sequence
MDGNPSNGVG PQEPNTTMGR STQPELGALD LDTLFQEGDD KTWDMDDWNW DPYQMFAEPK 60 TAPAMLPGCH ALKRRKPSGP PAAAPPGTTA PHQTMPGPQD AGGMLGTFPQ HPQQQAMQAG 120 GQPHTSGTLP GQYPHPYPQP GLHALQSNLA APWQGTAADA GMSAGLMPAA PGAPGAPYGY 180 GGMNVQGAAA TPNMTPMQQQ QPDWIHFPTA CANASNAGGC RALSQMELLP THHQAATAAA 240 MHNTTRPPSA AGASAGMRPS SAAASSQQLL NNFLPPAASM EYGTHLVPPN QTCGAPATPA 300 AAAANLQLPA TASLLPTPSA ESDISPRDCS AAAGSMGGET TVISEDVADD QKMICQVPGC 360 GKDLTWLKDY HQRYRICDVH IRLPQVMKDG RLQRFCQQCG RFHDLSAFDG NRKSCREQLQ 420 KHNARRRRRA QMEQNMCLAE SLASAVDEKT EVGKLLTGLL SNPLQLHALR VLLGVQTHPA 480 LPKGQPHPAE HNAALAAVTP PESGETDVAC PAADEEALPG ELQPATIEAA KGAAAALTPG 540 GVATHAPLAP IPPGQPCEEP PTYEVARDIM DSNGQFASGF DSEHKMLRLS VKMFNVTPAE 600 LPPDLRYQLA GWMSAAPAGL EAFIRPGCVF LTLQALVSNS CYDDAVRYGM QRLLQRILSP 660 YAAAFWRSGT MLLQLLSTVA VVSHGQLLSV TTYDKPAKAQ QHLPCVSHVS VLCVVAGKPC 720 SFTVHGTHIA AADCSVVVKS QGAFLKVGAQ PAPAAADDDR TLSHSHTAGC GFCHGTAAAG 780 HASHHHATAA AAHQAVAVSF MAPPGPSRVL WVEVMKGSWL SAETRAVLVV SDEELAQEVC 840 ALQACVAEGV LTHGQMDALL LDLGLVLQHI EGGPSPPGLR HHDIAEKARR LLAFAADQGC 900 AAMAKAVLPL ASAQCECASD VVAAIHASTA KDGLSLLHRA VRSGNAALVH GMLEWGKQHG 960 YKWRIATGGP SNISPLHLAA LLDDDGHIAL MLLDACDAPG AFTECASCDG VTPFHLAFQM 1020 GHYNLDRVLK VLLADDITTV TEQAPPSGWD LLCPESASSK TSRQSNSLDA CLFCQTTLPP 1080 LLLSIKAHCT GCGTRQPCIK EDGKAVTDRA NEAVTRTAVS IGVTHPVKQD SKGGKGGRTG 1140 SSGSATAPKR SRAAQQKVVP PFTSDLCPHA TGRVLSVTAM CQICHSNRVM EVA*

Sequence ? help Back to Top

Protein Sequence Length: 1194 aa Download sequence

MDGNPSNGVG PQEPNTTMGR STQPELGALD LDTLFQEGDD KTWDMDDWNW DPYQMFAEPK  60
TAPAMLPGCH ALKRRKPSGP PAAAPPGTTA PHQTMPGPQD AGGMLGTFPQ HPQQQAMQAG  120
GQPHTSGTLP GQYPHPYPQP GLHALQSNLA APWQGTAADA GMSAGLMPAA PGAPGAPYGY  180
GGMNVQGAAA TPNMTPMQQQ QPDWIHFPTA CANASNAGGC RALSQMELLP THHQAATAAA  240
MHNTTRPPSA AGASAGMRPS SAAASSQQLL NNFLPPAASM EYGTHLVPPN QTCGAPATPA  300
AAAANLQLPA TASLLPTPSA ESDISPRDCS AAAGSMGGET TVISEDVADD QKMICQVPGC  360
GKDLTWLKDY HQRYRICDVH IRLPQVMKDG RLQRFCQQCG RFHDLSAFDG NRKSCREQLQ  420
KHNARRRRRA QMEQNMCLAE SLASAVDEKT EVGKLLTGLL SNPLQLHALR VLLGVQTHPA  480
LPKGQPHPAE HNAALAAVTP PESGETDVAC PAADEEALPG ELQPATIEAA KGAAAALTPG  540
GVATHAPLAP IPPGQPCEEP PTYEVARDIM DSNGQFASGF DSEHKMLRLS VKMFNVTPAE  600
LPPDLRYQLA GWMSAAPAGL EAFIRPGCVF LTLQALVSNS CYDDAVRYGM QRLLQRILSP  660
YAAAFWRSGT MLLQLLSTVA VVSHGQLLSV TTYDKPAKAQ QHLPCVSHVS VLCVVAGKPC  720
SFTVHGTHIA AADCSVVVKS QGAFLKVGAQ PAPAAADDDR TLSHSHTAGC GFCHGTAAAG  780
HASHHHATAA AAHQAVAVSF MAPPGPSRVL WVEVMKGSWL SAETRAVLVV SDEELAQEVC  840
ALQACVAEGV LTHGQMDALL LDLGLVLQHI EGGPSPPGLR HHDIAEKARR LLAFAADQGC  900
AAMAKAVLPL ASAQCECASD VVAAIHASTA KDGLSLLHRA VRSGNAALVH GMLEWGKQHG  960
YKWRIATGGP SNISPLHLAA LLDDDGHIAL MLLDACDAPG AFTECASCDG VTPFHLAFQM  1020
GHYNLDRVLK VLLADDITTV TEQAPPSGWD LLCPESASSK TSRQSNSLDA CLFCQTTLPP  1080
LLLSIKAHCT GCGTRQPCIK EDGKAVTDRA NEAVTRTAVS IGVTHPVKQD SKGGKGGRTG  1140
SSGSATAPKR SRAAQQKVVP PFTSDLCPHA TGRVLSVTAM CQICHSNRVM EVA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	4e-23	SBP family protein