PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cz06g00090.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
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Family | C2H2 | ||||||||
Protein Properties | Length: 175aa MW: 18481.7 Da PI: 8.9025 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.9 | 3.7e-05 | 141 | 163 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cg+ F ++ +L+ H ++ Cz06g00090.t1 141 FACHQCGRQFLDPAQLVDHVERC 163 78*****************9887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MRQFSSKAAS MFSNLSKQAG AAASRFTTPS AAAAVDPSNT VRGSADRRRV WNGQQTSNHP 60 AVATPPAPVS KPAAAVANPA ALPEVCPRCS ARFSTVQELI MHVDQQHSSQ QQQQHQRIQE 120 AVGGMVHNPT HQAAIGAGDV FACHQCGRQF LDPAQLVDHV ERCKADAKSS CVMS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41835.1 | 4e-06 | C2H2 family protein |