PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz05g23090.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

SBP

Protein Properties

Length: 948aa MW: 99704.7 Da PI: 6.1566

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz05g23090.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	112.8	2e-35	505	581	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv+gC adl+ +++yh r+k+Ce h k ++++ +g+ qrfCqqC+rfh l +fD +krsCr rL++hn+rrrk+q Cz05g23090.t1 505 ICQVDGCYADLKGLRDYHLRYKICEYHLKVSSIMKDGKPQRFCQQCGRFHLLGDFDSNKRSCRARLQRHNARRRKRQ 581 5**************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 948 aa Download sequence
MSTADEVALV GAASFRHKVC RFRDQSVSLH SGLARFFNKH TFSDLVVVAP DGRKLLCHQI 60 ILSACSKPFA NMLEKAALQG EELPVWGIDS DGLQAIINYF YTGECVLSFE NAVAILDASQ 120 RLEVPAVTTA AEAFIAEVMH PTTVLTLYRQ AAHYKVEDLA RQCLGMIKRR LQEVAVTEDF 180 RTTDFNTLME ILLALKGSQH DMMLFKAAWS WVIADVKHVS YLEEILRVVK VPDITFQELM 240 DLGNRRAAAP GTDVGNYSVE GLSISQLQAA AAMQGGGNAG EVGSLDFGPV GEGEKQGFAR 300 GSNASQYSSL PAQAVQQAMG GSVYAAGLPV GDALTSRKSS SLPRAGSALE DDTTLDGFQG 360 YHGDAGHVYN NSLSKPASQR GSPDMLPGQL SLSSYPIAGA LAAGGALEGA GDHAGAGGAY 420 PTGKYLGDVG GSGQDVTPPG GRNGRFSAMS DYMTGDDVDR AEVSGRGGKY GTDDSGGDGN 480 GARGREGMLR SNSTLMNRNN YAKGICQVDG CYADLKGLRD YHLRYKICEY HLKVSSIMKD 540 GKPQRFCQQC GRFHLLGDFD SNKRSCRARL QRHNARRRKR QGEDDVGMML PGDQLSPMPA 600 TAPPATAGIA AKKARPSSSS GGMPDVGGSS MGHSLKGFAG SGVPAAGMGL TGFGGLTYYG 660 VNEDIGGGEE NVADVPGRRN GSVGPAAARP PAYPVGHSEA ADGEATTAGG GSSWALQILA 720 DVAQEDNQQH KDPAGHRDAS DVIPGAVPKG KRSANTLRKA PSQDVPMQSS DIAPDQDQPA 780 HMEPEIPSAA DQQQHPDQQE QPQHQQQNEQ QHAHLQLDAV GANSSSEAPA GPAAESMSPV 840 KDVAKDSADR RYDQHQVQQR QHGVDVSLKQ PPLSSHHSTA GACDIAAAKD TAKQQQSKHA 900 TSSKDGHATG NDVHAQEMIL GGMGDAETGA NDSGLKPLTT TEPAGVT*

Sequence ? help Back to Top

Protein Sequence Length: 948 aa Download sequence

MSTADEVALV GAASFRHKVC RFRDQSVSLH SGLARFFNKH TFSDLVVVAP DGRKLLCHQI  60
ILSACSKPFA NMLEKAALQG EELPVWGIDS DGLQAIINYF YTGECVLSFE NAVAILDASQ  120
RLEVPAVTTA AEAFIAEVMH PTTVLTLYRQ AAHYKVEDLA RQCLGMIKRR LQEVAVTEDF  180
RTTDFNTLME ILLALKGSQH DMMLFKAAWS WVIADVKHVS YLEEILRVVK VPDITFQELM  240
DLGNRRAAAP GTDVGNYSVE GLSISQLQAA AAMQGGGNAG EVGSLDFGPV GEGEKQGFAR  300
GSNASQYSSL PAQAVQQAMG GSVYAAGLPV GDALTSRKSS SLPRAGSALE DDTTLDGFQG  360
YHGDAGHVYN NSLSKPASQR GSPDMLPGQL SLSSYPIAGA LAAGGALEGA GDHAGAGGAY  420
PTGKYLGDVG GSGQDVTPPG GRNGRFSAMS DYMTGDDVDR AEVSGRGGKY GTDDSGGDGN  480
GARGREGMLR SNSTLMNRNN YAKGICQVDG CYADLKGLRD YHLRYKICEY HLKVSSIMKD  540
GKPQRFCQQC GRFHLLGDFD SNKRSCRARL QRHNARRRKR QGEDDVGMML PGDQLSPMPA  600
TAPPATAGIA AKKARPSSSS GGMPDVGGSS MGHSLKGFAG SGVPAAGMGL TGFGGLTYYG  660
VNEDIGGGEE NVADVPGRRN GSVGPAAARP PAYPVGHSEA ADGEATTAGG GSSWALQILA  720
DVAQEDNQQH KDPAGHRDAS DVIPGAVPKG KRSANTLRKA PSQDVPMQSS DIAPDQDQPA  780
HMEPEIPSAA DQQQHPDQQE QPQHQQQNEQ QHAHLQLDAV GANSSSEAPA GPAAESMSPV  840
KDVAKDSADR RYDQHQVQQR QHGVDVSLKQ PPLSSHHSTA GACDIAAAKD TAKQQQSKHA  900
TSSKDGHATG NDVHAQEMIL GGMGDAETGA NDSGLKPLTT TEPAGVT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	6e-20	SBP family protein