PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz04g32130.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

HSF

Protein Properties

Length: 606aa MW: 64110.3 Da PI: 6.0257

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz04g32130.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111	8.4e-35	30	122	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelleki 97 Fl+k+y+++ed++++ ++sw +g+sf+v+++ ef++++Lp++Fkh+nf+SFvRQLn+YgF+kv+ ++ weF++++F +g+kell++i Cz04g32130.t1 30 FLTKTYDLVEDPSTDPIVSWAPDGHSFIVWKPPEFSRDLLPRHFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANDHFIRGRKELLREI 116 9**************************************************************999.........*************** PP XXXXXX CS HSF_DNA-bind 98 krkkse 103 +r+k + Cz04g32130.t1 117 HRRKPS 122 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MSGMRRPGSA SSSGGGHSAD LSAANQPPPF LTKTYDLVED PSTDPIVSWA PDGHSFIVWK 60 PPEFSRDLLP RHFKHNNFSS FVRQLNTYGF RKVDPDRWEF ANDHFIRGRK ELLREIHRRK 120 PSATPTNLAS ALMPQGQTAI ELGNYGGMQD EIDALKRDKN VLMLELVRLR QQQQTADSRI 180 RDLQLRLDST EARQNTIVNF LARVAQNPTV LQQMVSVAQS AGLQRLSSGR SGANRKKRRA 240 RGGDEDSDGS GGPAPEDNHA QIIQYTPNHN GDFTEALLRS MASLIPVSPA GNTAASSFDL 300 SSPFNTMHLG QPLHRHGAEV DIGELAADAD RQLNAMKIDS DLPLDAHQQQ QAVAPASVTI 360 QEQPASSSFH LNSVPSLGAD ATVAMSSALP ANGDSPTAAA IASSPFITND SMPQQQQNHY 420 PPAAAASTSI PGLPNISSPI GAAPAAAVAA PLQPSGGSGF LGGPMPAGMT TVINPLGQAM 480 SVPGPSAAPP AGNPVVSMPP NGTFLPASHS QPSTSAAAVV AVDSKTRVDS PDDDDLDLPM 540 DLINGLQSMG STDLMLAEDL SKDELWSSLF GSQSSDGIAD FSNLHLADGA LPAHAPHHHH 600 VHRQP*

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MSGMRRPGSA SSSGGGHSAD LSAANQPPPF LTKTYDLVED PSTDPIVSWA PDGHSFIVWK  60
PPEFSRDLLP RHFKHNNFSS FVRQLNTYGF RKVDPDRWEF ANDHFIRGRK ELLREIHRRK  120
PSATPTNLAS ALMPQGQTAI ELGNYGGMQD EIDALKRDKN VLMLELVRLR QQQQTADSRI  180
RDLQLRLDST EARQNTIVNF LARVAQNPTV LQQMVSVAQS AGLQRLSSGR SGANRKKRRA  240
RGGDEDSDGS GGPAPEDNHA QIIQYTPNHN GDFTEALLRS MASLIPVSPA GNTAASSFDL  300
SSPFNTMHLG QPLHRHGAEV DIGELAADAD RQLNAMKIDS DLPLDAHQQQ QAVAPASVTI  360
QEQPASSSFH LNSVPSLGAD ATVAMSSALP ANGDSPTAAA IASSPFITND SMPQQQQNHY  420
PPAAAASTSI PGLPNISSPI GAAPAAAVAA PLQPSGGSGF LGGPMPAGMT TVINPLGQAM  480
SVPGPSAAPP AGNPVVSMPP NGTFLPASHS QPSTSAAAVV AVDSKTRVDS PDDDDLDLPM  540
DLINGLQSMG STDLMLAEDL SKDELWSSLF GSQSSDGIAD FSNLHLADGA LPAHAPHHHH  600
VHRQP*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	235	241	RKKRRAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17750.1	3e-75	HSF family protein