PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz02g40170.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

SBP

Protein Properties

Length: 736aa MW: 79044.8 Da PI: 7.907

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz02g40170.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	84.5	1.4e-26	32	107	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 C+++gC++ l++ k y+ h+vC++h ++ v+ ++g+e rfCqqC++f ++ f+ +krsC L++hn+rrrk + Cz02g40170.t1 32 CKIPGCTEPLTKQKAYNAVHRVCDMHMRSLVIDMDGVETRFCQQCGKFEPVDRFEGTKRSCTYSLKDHNNRRRKLT 107 *************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 736 aa Download sequence
MSGSTPSAVS ALSPRELKTK KTVKTKERTH YCKIPGCTEP LTKQKAYNAV HRVCDMHMRS 60 LVIDMDGVET RFCQQCGKFE PVDRFEGTKR SCTYSLKDHN NRRRKLTASR ANKKKASLAG 120 LARAASTPAP ISTQYEFRPQ VPTAVGCSRY DAAFSQPESH NPMLSGMLGM MMEAASTPAA 180 AMQYHPPMTP TTLAEQQHQQ MLMSANPDSW FGAAAAASTP HVQGFSAPQL NATGSRSTES 240 DASDCKPLLV STSTVIDTLT ACSASPNPAA GPMKQQPCSG DSTCRALQPR PSHSCARSRS 300 STPKACDTQG NCRPAQFSPI STPARGNDQR ACATPHVPVL VMPGARQMAG GSRVNVFQGG 360 NSMQGNQGPT LTSDASEGFV VSGYPYRHPA DEMARSAAGG IGHFDVPAYH VDINRMFRHI 420 ADQMQAPGRA SGPAGMEQLA QELMTALMSQ QASGHCQQSS MMLQLLGSLQ QQLRSPGNSP 480 SLHMLITRVL QLCQMQQAGV VGDVAGQATL QSYCQPAMMK ADPAAVMGTA PAAGVMFPPA 540 QPTQQLIQLL MQQLQQCDYR AVHPMHGLIQ QLILALSVGQ QGHNPYMPTA AGADVPALMQ 600 QLIGMLQQVP GARGPPPGSW MQNIMMPQGS MEMPLFGCPA LSNVKAMNHG MFPAAAQQQE 660 EMWLDTEPDS NNRAMKSVRC EDDSLERDQL LYDCWALFNS AEQELNQSSQ GAGDSQQPPR 720 GDTPRPDIYT NLPDA*

Sequence ? help Back to Top

Protein Sequence Length: 736 aa Download sequence

MSGSTPSAVS ALSPRELKTK KTVKTKERTH YCKIPGCTEP LTKQKAYNAV HRVCDMHMRS  60
LVIDMDGVET RFCQQCGKFE PVDRFEGTKR SCTYSLKDHN NRRRKLTASR ANKKKASLAG  120
LARAASTPAP ISTQYEFRPQ VPTAVGCSRY DAAFSQPESH NPMLSGMLGM MMEAASTPAA  180
AMQYHPPMTP TTLAEQQHQQ MLMSANPDSW FGAAAAASTP HVQGFSAPQL NATGSRSTES  240
DASDCKPLLV STSTVIDTLT ACSASPNPAA GPMKQQPCSG DSTCRALQPR PSHSCARSRS  300
STPKACDTQG NCRPAQFSPI STPARGNDQR ACATPHVPVL VMPGARQMAG GSRVNVFQGG  360
NSMQGNQGPT LTSDASEGFV VSGYPYRHPA DEMARSAAGG IGHFDVPAYH VDINRMFRHI  420
ADQMQAPGRA SGPAGMEQLA QELMTALMSQ QASGHCQQSS MMLQLLGSLQ QQLRSPGNSP  480
SLHMLITRVL QLCQMQQAGV VGDVAGQATL QSYCQPAMMK ADPAAVMGTA PAAGVMFPPA  540
QPTQQLIQLL MQQLQQCDYR AVHPMHGLIQ QLILALSVGQ QGHNPYMPTA AGADVPALMQ  600
QLIGMLQQVP GARGPPPGSW MQNIMMPQGS MEMPLFGCPA LSNVKAMNHG MFPAAAQQQE  660
EMWLDTEPDS NNRAMKSVRC EDDSLERDQL LYDCWALFNS AEQELNQSSQ GAGDSQQPPR  720
GDTPRPDIYT NLPDA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	9e-18	SBP family protein