PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz02g00140.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

CPP

Protein Properties

Length: 771aa MW: 78662.5 Da PI: 7.8743

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz02g00140.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.4	3.2e-14	59	96	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCk+s+Clk+YCeCfa+g++C++ C+C +C+N++ Cz02g00140.t1 59 SRKQCNCKNSRCLKLYCECFASGRYCDN-CNCVNCFNNK 96 679**********************9.******97 PP
2	TCR	52.6	9.1e-17	142	181	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +++kgCnCkks ClkkYCeCf+ag Cse CkC dCkN e Cz02g00140.t1 142 RHTKGCNCKKSYCLKKYCECFQAGIVCSEMCKCIDCKNYE 181 589***********************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 771 aa Download sequence
MVSSMSSGGY QQLPAGSGAP SYRATAATPP AGAQLQQNMI KTPGSRKSSQ VSGPPQKNSR 60 KQCNCKNSRC LKLYCECFAS GRYCDNCNCV NCFNNKASEA IRQSAVEAIL ERNPNAFRPK 120 IQGSEGGEQL QNVRLARDGS VRHTKGCNCK KSYCLKKYCE CFQAGIVCSE MCKCIDCKNY 180 EGSEQRSQVL ANQDFGANTT AATLTLGAQG QQTLTVKRPR LQQPGPHTPS HVPRLLVPRH 240 HQLATALPTP AGAPKPAHGM SHLGVALQPV HALGAAAALQ LAQPTRSSIF DVVNGVVKTN 300 MIEELCRLLI LVADEEASKY PARATAHTQQ QQQVSSAIDA AVDTTQQGGS QGHHDSGDNV 360 QGGLSNSNVG VDGEMPSKKL KLEDSVDDQV GGSRATPASA AKPTTPAAVA APNGVSTTGA 420 AAAQEGGQAD AATAMQQQQQ QQQQQAEPGA LMAAPASSSS PSSMYAAQER AVLMEFDQIV 480 QKVVDAADKK AGAAAGSSIN NTAAALQAAA ALQAAGGFQS LVGGGANGLS HPGVLMSSSH 540 GYPAGAVAQL RLPAALQPGQ AHAVRQLAAA QPQLAGASAP NLMGLTQQAM LLPSSAHAAA 600 YQLGQSLQLR GISQPFITAV SHPGGVSAAT PQHFAMLGLQ GALPPRAGGA LGQISVGMSG 660 QPLSAAQLLQ MSAAGQLPQG FMISSDGGAG PVAPGTGMIH LPGQYLSLMT TPGLETGDTA 720 GAGAAVTDMS GTQHIEVPHE GVTGMPQDVA VAEGTAVAEG PDPAPATHQH *

Sequence ? help Back to Top

Protein Sequence Length: 771 aa Download sequence

MVSSMSSGGY QQLPAGSGAP SYRATAATPP AGAQLQQNMI KTPGSRKSSQ VSGPPQKNSR  60
KQCNCKNSRC LKLYCECFAS GRYCDNCNCV NCFNNKASEA IRQSAVEAIL ERNPNAFRPK  120
IQGSEGGEQL QNVRLARDGS VRHTKGCNCK KSYCLKKYCE CFQAGIVCSE MCKCIDCKNY  180
EGSEQRSQVL ANQDFGANTT AATLTLGAQG QQTLTVKRPR LQQPGPHTPS HVPRLLVPRH  240
HQLATALPTP AGAPKPAHGM SHLGVALQPV HALGAAAALQ LAQPTRSSIF DVVNGVVKTN  300
MIEELCRLLI LVADEEASKY PARATAHTQQ QQQVSSAIDA AVDTTQQGGS QGHHDSGDNV  360
QGGLSNSNVG VDGEMPSKKL KLEDSVDDQV GGSRATPASA AKPTTPAAVA APNGVSTTGA  420
AAAQEGGQAD AATAMQQQQQ QQQQQAEPGA LMAAPASSSS PSSMYAAQER AVLMEFDQIV  480
QKVVDAADKK AGAAAGSSIN NTAAALQAAA ALQAAGGFQS LVGGGANGLS HPGVLMSSSH  540
GYPAGAVAQL RLPAALQPGQ AHAVRQLAAA QPQLAGASAP NLMGLTQQAM LLPSSAHAAA  600
YQLGQSLQLR GISQPFITAV SHPGGVSAAT PQHFAMLGLQ GALPPRAGGA LGQISVGMSG  660
QPLSAAQLLQ MSAAGQLPQG FMISSDGGAG PVAPGTGMIH LPGQYLSLMT TPGLETGDTA  720
GAGAAVTDMS GTQHIEVPHE GVTGMPQDVA VAEGTAVAEG PDPAPATHQH *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20110.1	4e-44	CPP family protein