PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz01g39200.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

ERF

Protein Properties

Length: 594aa MW: 64645.4 Da PI: 7.3267

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz01g39200.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	28.1	5e-09	153	200	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y GVr ++ +grW +eI + r++++lg f +ee a+ ++aa + l+g Cz01g39200.t1 153 KYLGVRLHS-KGRWKCEITVN-----RQTIYLGAFAVPEEGAQWYDAACLLLHG 200 899***9.7*****4.....6*******************998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
MEQRTISHVL KDALENLSSK KRPYQAEEQA AYEEFVRRYS RPDGPKHYHH DQQLLAADAS 60 QNRPMDSVVD RKPAARDDSL QQRLMSAMAP MRDRSDANVA PEPARQGPKY KDHHAAAGAL 120 QPPTKSARRS PLKPRSSLKL PLKGAQPWQS DNKYLGVRLH SKGRWKCEIT VNRQTIYLGA 180 FAVPEEGAQW YDAACLLLHG PGKTRNFAAS AYSKEFLKQV LEYINQRYPQ VRIPYASLAE 240 TSAPQSKEQS EAEADSGDQA TSGDADAAAA VSAGNDNSRV AEALRLPFPR GSKYMGVYLC 300 KNGRWKAAIR FGKKSRFLGN FSAEIEGARW YDAACLLLYG LGKTRNFPQT TYNSMFLRDV 360 FADFSRRQPE LTFPFAWLAE EGIGDAALQQ VDELPYLPGS ALCRWRTLPS AADADTANRA 420 VAAAAAQSWS SEAAEQVCPA AQQSAESLSE TESPSAAAAL ARDASLEADV GTSALTPARQ 480 AVACLHPAWA PAPVPTQPLM SLDQAVADIA KQCQRPLSDE PAVAADHGLA LSHAGMQAVA 540 AARAQDEQQT AHQCLVTLDE AISHWSRIAL ASCRVGFGKE LMNNAAISDN QQE*

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

MEQRTISHVL KDALENLSSK KRPYQAEEQA AYEEFVRRYS RPDGPKHYHH DQQLLAADAS  60
QNRPMDSVVD RKPAARDDSL QQRLMSAMAP MRDRSDANVA PEPARQGPKY KDHHAAAGAL  120
QPPTKSARRS PLKPRSSLKL PLKGAQPWQS DNKYLGVRLH SKGRWKCEIT VNRQTIYLGA  180
FAVPEEGAQW YDAACLLLHG PGKTRNFAAS AYSKEFLKQV LEYINQRYPQ VRIPYASLAE  240
TSAPQSKEQS EAEADSGDQA TSGDADAAAA VSAGNDNSRV AEALRLPFPR GSKYMGVYLC  300
KNGRWKAAIR FGKKSRFLGN FSAEIEGARW YDAACLLLYG LGKTRNFPQT TYNSMFLRDV  360
FADFSRRQPE LTFPFAWLAE EGIGDAALQQ VDELPYLPGS ALCRWRTLPS AADADTANRA  420
VAAAAAQSWS SEAAEQVCPA AQQSAESLSE TESPSAAAAL ARDASLEADV GTSALTPARQ  480
AVACLHPAWA PAPVPTQPLM SLDQAVADIA KQCQRPLSDE PAVAADHGLA LSHAGMQAVA  540
AARAQDEQQT AHQCLVTLDE AISHWSRIAL ASCRVGFGKE LMNNAAISDN QQE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	4e-09	AP2 family protein