PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028127658.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 247aa MW: 28108.6 Da PI: 6.2455 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.3 | 4.8e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G +W+++++ g++R++k+c++rw +yl XP_028127658.1 14 KGPWTAEEDKKLINFILTNGQYCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 54 | 3.9e-17 | 69 | 111 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 T+ E++l +d++++lG++ W++Ia++++ gRt++++k++w+++ XP_028127658.1 69 LLTESEEQLVIDLHARLGNR-WSKIASRLP-GRTDNEIKNHWNTH 111 569*****************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MGRQPCCDKL GVKKGPWTAE EDKKLINFIL TNGQYCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL TESEEQLVID LHARLGNRWS KIASRLPGRT DNEIKNHWNT HIKKKLLKMG 120 IDPVTHEPLA NKESNPTEPS SNSELSRETN SNNQEQFQET SKVIIPSLEK KYSSDSSTEN 180 CYDDPLMGCL WGDESWEFPA SGHSFSDISL PSLDESCAWL LDCQDFGVHD FGVDCFNDVN 240 VMNTLNT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22680.1 | 1e-89 | MYB family protein |