PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028127257.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 301aa    MW: 34278.3 Da    PI: 8.2264
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028127257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding248.8e-082872345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WT+ E +l+ +a + + ++   +W ++a++++ g+t  ++   + 
   XP_028127257.1 28 NWTPAENKLFENALAVYDKEtpdRWQRVAAMIP-GKTVRDVMKQYK 72
                     8*****************99*************.****99988775 PP
2Myb_DNA-binding45.81.4e-14135179347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
   XP_028127257.1 135 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 179
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MKWGMEILSP ASNLSNSNWL FEESRSTNWT PAENKLFENA LAVYDKETPD RWQRVAAMIP  60
GKTVRDVMKQ YKELEDDVSS IEAGLVPNPW DNSSPFTLEW GNSDGICGFK QSYSPVGKRS  120
SAGRVSEQER KKGVPWTEEE HKLFLMGLKK YGKGDWRNIS RNFVITRTPT QVASHAQKYF  180
IRQLSGGKDK RRASIHDITT VNLNEDQTHS PDNKKPPSPD QSSTLTQQQN SASMPKTTFQ  240
WNHPMDFNQT HGNMFMNPYG INSYGIKMEC PDLPVSVNHE SYVGPQNMVF QMQSAHHYPN  300
G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.11e-108MYB_related family protein