PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028127112.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YA
Protein Properties Length: 322aa    MW: 36070.2 Da    PI: 8.3815
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028127112.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA1002.4e-31175231158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVN+KQy++Il+RRq+Rakle+++kl  k+r+pylheSRh hAl+R RgsgGrF
  XP_028127112.1 175 DGPIYVNSKQYHAILRRRQMRAKLEAQNKL-VKTRRPYLHESRHVHALNRVRGSGGRF 231
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MAIRVQNFPK KAFDQSSIYS MSNFAVNCPS WWNSQEQQFP QSISKHLSLK LESPPQLCEE  60
ARHLRLQRHD QDSSSTQSTV QSHHEVTAMG GTNAQDQSIS SESVPDESYE KHSEFVNISP  120
SQIDSSQSIN HIPHPYADPY CGGLFASYGP PTVIQPQMVG MTPARVALPL DLAEDGPIYV  180
NSKQYHAILR RRQMRAKLEA QNKLVKTRRP YLHESRHVHA LNRVRGSGGR FLSTKKLQQP  240
DLTPTPDSRC ISNSIHSYKK DASEFEICQS ETVERGASIP SFSNVTGVSN SDVFQQPYHR  300
FSAISPHTDV GNGTRHCASV IR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.13e-45NF-YA family protein