PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028127111.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NF-YA | ||||||||
Protein Properties | Length: 322aa MW: 36070.2 Da PI: 8.3815 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 100 | 2.4e-31 | 175 | 231 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p+YVN+KQy++Il+RRq+Rakle+++kl k+r+pylheSRh hAl+R RgsgGrF XP_028127111.1 175 DGPIYVNSKQYHAILRRRQMRAKLEAQNKL-VKTRRPYLHESRHVHALNRVRGSGGRF 231 57****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MAIRVQNFPK KAFDQSSIYS MSNFAVNCPS WWNSQEQQFP QSISKHLSLK LESPPQLCEE 60 ARHLRLQRHD QDSSSTQSTV QSHHEVTAMG GTNAQDQSIS SESVPDESYE KHSEFVNISP 120 SQIDSSQSIN HIPHPYADPY CGGLFASYGP PTVIQPQMVG MTPARVALPL DLAEDGPIYV 180 NSKQYHAILR RRQMRAKLEA QNKLVKTRRP YLHESRHVHA LNRVRGSGGR FLSTKKLQQP 240 DLTPTPDSRC ISNSIHSYKK DASEFEICQS ETVERGASIP SFSNVTGVSN SDVFQQPYHR 300 FSAISPHTDV GNGTRHCASV IR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72830.1 | 3e-45 | NF-YA family protein |