PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028126949.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 1740aa MW: 190870 Da PI: 6.1477 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23 | 1.8e-07 | 785 | 826 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WTteE +++ d + +G++ + +Ia+ + ++t +c+ +++k XP_028126949.1 785 PWTTEEKDIFMDKLATFGKD-FGKIASFLD-HKTTADCIVFYYK 826 8*****************99.*********.********99998 PP | |||||||
2 | Myb_DNA-binding | 27.3 | 8.3e-09 | 1005 | 1045 | 4 | 46 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT +E ++++av +G++ ++ I+r++ +++ qck ++ k XP_028126949.1 1005 WTDQEKSIFIQAVSSYGKD-FTMISRCVR-TKSMDQCKAFFSK 1045 *****************99.*********.********99866 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1740 aa Download sequence |
MPPAPEPVPW DRKDFFKERK HERSSDSLGS VSRWRETPHH REFRSRPPGH GKQGSWHMYP 60 EEFGHGFTPS RSNEKNLDDV GCRPSGSRGD GNADVNSREY RVSFSQKDWK GHSWENGNGS 120 WPFAPGGPLD VSYQRSVDDM LTYNSHPHSD FVNTWEQLNF KDQHDKIGSV NGLGTGQRFD 180 RENSMGSIDW KPLKWTRSGS MSSRGSGFSH SSSSKSMGVD SGEAKVEVQV RNVTPVQSPS 240 GDAVGCATSA APSEEASSRK KPRLGWGEGL AKYEKKKVEG PDDSATKHGM VVCGNIETLH 300 SHILNLSDKS PRVTGLSDCA SPATPSSVAC SSSPGEDKPF AKAANIDNYT SNLSSSPRLF 360 SQNIVEGTDF NLENLELTPI ANLSSSIGEL LQFDDQGSVD SSFLRSTAMN KLLLWKGGIS 420 KALEMTESEI DLLENELKSL ISKSEDICPC PAVISSLQRE CRATPCEELV VTTDAIPRPA 480 PLLLVSSGDM IVEKAVGGFK EHGQVKDEDV DSPGTVTFKF VDPLSSAEAV TLSESVKHGE 540 SSGDLDARKS GKQEVNGSNE EKIEGLSACE GGGQLTTSRS CAAPVVTSLC RDREDTLYDL 600 ILASNKDSAN RASEVFNKLL PSGQCHIDIF RTTSISSLQN DPLIEEKFAK RKRFLRFKER 660 VITLKFRAFQ HLWKEDMRLL SIRKYRAKSQ KKMELCSRSP YNGYQKHRSS IRSRFSSPGG 720 YLSLVSTTEI INFTSKLLSD SQVKLCRNHL KMPALILDKG SSFISSNGLV EDPCAVEKER 780 ATINPWTTEE KDIFMDKLAT FGKDFGKIAS FLDHKTTADC IVFYYKNHKS DCFVKIKKSE 840 FSKKGKSWSN NNYLVTSGKR WNRDTNAASL DMLGAASAIA ANADDGMENQ QKCTSRFLRG 900 VTSNYRASQG DDGMLERSGS LDIFGNERET VAADVLAGIY GAISSEAMSS CITSSVDPGE 960 IYRDQKWQKV GSLMRWPLTP EVTQNVDNDT CSDESCGEMM DPTYWTDQEK SIFIQAVSSY 1020 GKDFTMISRC VRTKSMDQCK AFFSKARKCL GLDTIGPRSG NEGMPRNDDT NDSGSDNEDA 1080 CVMEAGSVTC SQKSGSKIVK DMMLSDLNVN HFESDPAEIM NTQADINRSE NNGTGEIYCE 1140 DPELQSQNMV TDEKQAEGKP KSDFDGIIKM ENNVNSVLVS PDTEAGGDEA NAECTTAGES 1200 LLAKEANDHG ISVSGAEGDA KAVDLELEGQ QTASENDLND KQEENGHSNT SGPSDLNCSD 1260 QDLHTNKNAS ILAADTIAPL EFDVDHKQKK IALELNPPPE PHAISLEHNV SLVNVKTFNT 1320 DVPLRLDFEK VSDKPCQKSA GVDDYNQHQS GHSVLGCTDS SQILRGYPLQ VSMKKEMNGG 1380 IDIDVDSKKL APLQSLSKIE RNFHADVYLS QECFLQKCNS SKAHSSVAQL PFLSQEQKSD 1440 HSKPPSWRSS SGTEKPSRNG DVKLFGQILT HPSSHQKQNE DKGVQNPKLS SHNSNPSSHQ 1500 KQNEDKGVQN PKLSSHNSNL KINGTDSNSV PAKLDQNNHL GIENVPTRSY GFWDGHRIRT 1560 GFSTLPDSGI LLAKYPAAFS NYPTSSSNKD HQQPLHLAVK SNECNSNGVT VFSNREITSS 1620 NGVADYQFYR RSQEGGARMQ PFKVDMKQRR GEMLFSEMQR RNGYEAVSSI QQQGRGGMVG 1680 INVVGRGGIL VGGACTTSGV SDPVAAIKMH YVKSTEQFGG QTGGIIREEE SWRGKGDVGM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52250.1 | 1e-148 | MYB family protein |