PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028126783.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 935aa MW: 102367 Da PI: 5.6328

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028126783.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.8	2.5e-29	537	588	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ XP_028126783.1 537 AEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 588 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 935 aa Download sequence
MSNVLSPLQS MPASYMPFDA LNFSEQNTAA FAVSDGDVVG SSYSGGDKMM FQHMNTQLDF 60 LVDSAGGDYS GAKMGSGYFQ QNIGNCGIPR PLSQTLAEKM LKALSLFKES CRSGILAQVW 120 VPIKHGDQYI LSTCEQPYLL DQMLAGYREV SRAFTFSAEV KQGSFPGLPG RVFISKTPEW 180 TSNVVYYNKT EYLRVQHAVK HGVRGSIALP IFEDDPLEMS CCAVLELVTT KEKPDFDLEM 240 ETVCHALQAV NLRSTTPPRL YPQCLSNNQM AALAEITDVL RAVCHAHRLP LALTWIPCSY 300 NQRVGDENIR VRVREGKASL NEKCILCIEG TACYVNDGDL QGFVHACAEH YLEEAQGIVG 360 KALQSNHPFF FPDVKEYDIS EYPLVHHARK FGLNAAVAIR LRSMYTGNDD YILEFFLPLN 420 MKGSTEQQLL LNNLSGTMQR ICKSLRTVSD AELVGAEGSQ FAFQKELVPN FQTEAISRKT 480 TSREALLDSS LNSVDQMPLP LDGLDVFESK TIGLEPNGPR EQTSGSRRLT EKRRSTAEKN 540 VSLSVLQQYF SGSLKDAAKS IGVCPTTLKR ICRQHGISRW PSRKINKVNR SLKKIQTVLD 600 SVQGVEGGLK FDPTTGGLVA AADFDAGTSS SILFPTKKLS VQNPESLTQH ESAAISSVCP 660 STNHADNSAI KLEEDHFIMG GGNQVGPPRS RTRSQFMPNT KNNTNTNTNT NTNTNTNNNN 720 NNNSDSLVGE CCDDSKSTGL LLDARPLQPP DEMDTTGMDG GDNAGMMMME ADDDGVVIEH 780 NQPTTSSGMT DSSSGSGSGM TDSSSRSGSR AHGSSSSSPS FGEQQEHTKL QTSSKITVKA 840 TYKEDTVRFK FEPCGGCHKL YDEVGKRFKL HMGTFQLKYL DDEEEWVMLV TDSDLQECLD 900 ILDFVGTCTV KFLVRDATCS MGSSGSTNCF LAGVS

Sequence ? help Back to Top

Protein Sequence Length: 935 aa Download sequence

MSNVLSPLQS MPASYMPFDA LNFSEQNTAA FAVSDGDVVG SSYSGGDKMM FQHMNTQLDF  60
LVDSAGGDYS GAKMGSGYFQ QNIGNCGIPR PLSQTLAEKM LKALSLFKES CRSGILAQVW  120
VPIKHGDQYI LSTCEQPYLL DQMLAGYREV SRAFTFSAEV KQGSFPGLPG RVFISKTPEW  180
TSNVVYYNKT EYLRVQHAVK HGVRGSIALP IFEDDPLEMS CCAVLELVTT KEKPDFDLEM  240
ETVCHALQAV NLRSTTPPRL YPQCLSNNQM AALAEITDVL RAVCHAHRLP LALTWIPCSY  300
NQRVGDENIR VRVREGKASL NEKCILCIEG TACYVNDGDL QGFVHACAEH YLEEAQGIVG  360
KALQSNHPFF FPDVKEYDIS EYPLVHHARK FGLNAAVAIR LRSMYTGNDD YILEFFLPLN  420
MKGSTEQQLL LNNLSGTMQR ICKSLRTVSD AELVGAEGSQ FAFQKELVPN FQTEAISRKT  480
TSREALLDSS LNSVDQMPLP LDGLDVFESK TIGLEPNGPR EQTSGSRRLT EKRRSTAEKN  540
VSLSVLQQYF SGSLKDAAKS IGVCPTTLKR ICRQHGISRW PSRKINKVNR SLKKIQTVLD  600
SVQGVEGGLK FDPTTGGLVA AADFDAGTSS SILFPTKKLS VQNPESLTQH ESAAISSVCP  660
STNHADNSAI KLEEDHFIMG GGNQVGPPRS RTRSQFMPNT KNNTNTNTNT NTNTNTNNNN  720
NNNSDSLVGE CCDDSKSTGL LLDARPLQPP DEMDTTGMDG GDNAGMMMME ADDDGVVIEH  780
NQPTTSSGMT DSSSGSGSGM TDSSSRSGSR AHGSSSSSPS FGEQQEHTKL QTSSKITVKA  840
TYKEDTVRFK FEPCGGCHKL YDEVGKRFKL HMGTFQLKYL DDEEEWVMLV TDSDLQECLD  900
ILDFVGTCTV KFLVRDATCS MGSSGSTNCF LAGVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	0.0	Nin-like family protein