PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028126782.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 980aa MW: 107290 Da PI: 5.2592

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028126782.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.7	2.6e-29	582	633	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ XP_028126782.1 582 AEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 633 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 980 aa Download sequence
MEGVPLDGGT RHSISEESFN NIAELVNFDT YAGWCCSPST TDQLFMSNVL SPLQSMPASY 60 MPFDALNFSE QNTAAFAVSD GDVVGSSYSG GDKMMFQHMN TQLDFLVDSA GGDYSGAKMG 120 SGYFQQNIGN CGIPRPLSQT LAEKMLKALS LFKESCRSGI LAQVWVPIKH GDQYILSTCE 180 QPYLLDQMLA GYREVSRAFT FSAEVKQGSF PGLPGRVFIS KTPEWTSNVV YYNKTEYLRV 240 QHAVKHGVRG SIALPIFEDD PLEMSCCAVL ELVTTKEKPD FDLEMETVCH ALQAVNLRST 300 TPPRLYPQCL SNNQMAALAE ITDVLRAVCH AHRLPLALTW IPCSYNQRVG DENIRVRVRE 360 GKASLNEKCI LCIEGTACYV NDGDLQGFVH ACAEHYLEEA QGIVGKALQS NHPFFFPDVK 420 EYDISEYPLV HHARKFGLNA AVAIRLRSMY TGNDDYILEF FLPLNMKGST EQQLLLNNLS 480 GTMQRICKSL RTVSDAELVG AEGSQFAFQK ELVPNFQTEA ISRKTTSREA LLDSSLNSVD 540 QMPLPLDGLD VFESKTIGLE PNGPREQTSG SRRLTEKRRS TAEKNVSLSV LQQYFSGSLK 600 DAAKSIGVCP TTLKRICRQH GISRWPSRKI NKVNRSLKKI QTVLDSVQGV EGGLKFDPTT 660 GGLVAAADFD AGTSSSILFP TKKLSVQNPE SLTQHESAAI SSVCPSTNHA DNSAIKLEED 720 HFIMGGGNQV GPPRSRTRSQ FMPNTKNNTN TNTNTNTNTN TNNNNNNNSD SLVGECCDDS 780 KSTGLLLDAR PLQPPDEMDT TGMDGGDNAG MMMMEADDDG VVIEHNQPTT SSGMTDSSSG 840 SGSGMTDSSS RSGSRAHGSS SSSPSFGEQQ EHTKLQTSSK ITVKATYKED TVRFKFEPCG 900 GCHKLYDEVG KRFKLHMGTF QLKYLDDEEE WVMLVTDSDL QECLDILDFV GTCTVKFLVR 960 DATCSMGSSG STNCFLAGVS

Sequence ? help Back to Top

Protein Sequence Length: 980 aa Download sequence

MEGVPLDGGT RHSISEESFN NIAELVNFDT YAGWCCSPST TDQLFMSNVL SPLQSMPASY  60
MPFDALNFSE QNTAAFAVSD GDVVGSSYSG GDKMMFQHMN TQLDFLVDSA GGDYSGAKMG  120
SGYFQQNIGN CGIPRPLSQT LAEKMLKALS LFKESCRSGI LAQVWVPIKH GDQYILSTCE  180
QPYLLDQMLA GYREVSRAFT FSAEVKQGSF PGLPGRVFIS KTPEWTSNVV YYNKTEYLRV  240
QHAVKHGVRG SIALPIFEDD PLEMSCCAVL ELVTTKEKPD FDLEMETVCH ALQAVNLRST  300
TPPRLYPQCL SNNQMAALAE ITDVLRAVCH AHRLPLALTW IPCSYNQRVG DENIRVRVRE  360
GKASLNEKCI LCIEGTACYV NDGDLQGFVH ACAEHYLEEA QGIVGKALQS NHPFFFPDVK  420
EYDISEYPLV HHARKFGLNA AVAIRLRSMY TGNDDYILEF FLPLNMKGST EQQLLLNNLS  480
GTMQRICKSL RTVSDAELVG AEGSQFAFQK ELVPNFQTEA ISRKTTSREA LLDSSLNSVD  540
QMPLPLDGLD VFESKTIGLE PNGPREQTSG SRRLTEKRRS TAEKNVSLSV LQQYFSGSLK  600
DAAKSIGVCP TTLKRICRQH GISRWPSRKI NKVNRSLKKI QTVLDSVQGV EGGLKFDPTT  660
GGLVAAADFD AGTSSSILFP TKKLSVQNPE SLTQHESAAI SSVCPSTNHA DNSAIKLEED  720
HFIMGGGNQV GPPRSRTRSQ FMPNTKNNTN TNTNTNTNTN TNNNNNNNSD SLVGECCDDS  780
KSTGLLLDAR PLQPPDEMDT TGMDGGDNAG MMMMEADDDG VVIEHNQPTT SSGMTDSSSG  840
SGSGMTDSSS RSGSRAHGSS SSSPSFGEQQ EHTKLQTSSK ITVKATYKED TVRFKFEPCG  900
GCHKLYDEVG KRFKLHMGTF QLKYLDDEEE WVMLVTDSDL QECLDILDFV GTCTVKFLVR  960
DATCSMGSSG STNCFLAGVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein