PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028126779.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 1001aa MW: 109720 Da PI: 5.3313

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028126779.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.7	2.7e-29	603	654	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ XP_028126779.1 603 AEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 654 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1001 aa Download sequence
MEYPFSSREK GTGYWASPKV QMEGVPLDGG TRHSISEESF NNIAELVNFD TYAGWCCSPS 60 TTDQLFMSNV LSPLQSMPAS YMPFDALNFS EQNTAAFAVS DGDVVGSSYS GGDKMMFQHM 120 NTQLDFLVDS AGGDYSGAKM GSGYFQQNIG NCGIPRPLSQ TLAEKMLKAL SLFKESCRSG 180 ILAQVWVPIK HGDQYILSTC EQPYLLDQML AGYREVSRAF TFSAEVKQGS FPGLPGRVFI 240 SKTPEWTSNV VYYNKTEYLR VQHAVKHGVR GSIALPIFED DPLEMSCCAV LELVTTKEKP 300 DFDLEMETVC HALQAVNLRS TTPPRLYPQC LSNNQMAALA EITDVLRAVC HAHRLPLALT 360 WIPCSYNQRV GDENIRVRVR EGKASLNEKC ILCIEGTACY VNDGDLQGFV HACAEHYLEE 420 AQGIVGKALQ SNHPFFFPDV KEYDISEYPL VHHARKFGLN AAVAIRLRSM YTGNDDYILE 480 FFLPLNMKGS TEQQLLLNNL SGTMQRICKS LRTVSDAELV GAEGSQFAFQ KELVPNFQTE 540 AISRKTTSRE ALLDSSLNSV DQMPLPLDGL DVFESKTIGL EPNGPREQTS GSRRLTEKRR 600 STAEKNVSLS VLQQYFSGSL KDAAKSIGVC PTTLKRICRQ HGISRWPSRK INKVNRSLKK 660 IQTVLDSVQG VEGGLKFDPT TGGLVAAADF DAGTSSSILF PTKKLSVQNP ESLTQHESAA 720 ISSVCPSTNH ADNSAIKLEE DHFIMGGGNQ VGPPRSRTRS QFMPNTKNNT NTNTNTNTNT 780 NTNNNNNNNS DSLVGECCDD SKSTGLLLDA RPLQPPDEMD TTGMDGGDNA GMMMMEADDD 840 GVVIEHNQPT TSSGMTDSSS GSGSGMTDSS SRSGSRAHGS SSSSPSFGEQ QEHTKLQTSS 900 KITVKATYKE DTVRFKFEPC GGCHKLYDEV GKRFKLHMGT FQLKYLDDEE EWVMLVTDSD 960 LQECLDILDF VGTCTVKFLV RDATCSMGSS GSTNCFLAGV S

Sequence ? help Back to Top

Protein Sequence Length: 1001 aa Download sequence

MEYPFSSREK GTGYWASPKV QMEGVPLDGG TRHSISEESF NNIAELVNFD TYAGWCCSPS  60
TTDQLFMSNV LSPLQSMPAS YMPFDALNFS EQNTAAFAVS DGDVVGSSYS GGDKMMFQHM  120
NTQLDFLVDS AGGDYSGAKM GSGYFQQNIG NCGIPRPLSQ TLAEKMLKAL SLFKESCRSG  180
ILAQVWVPIK HGDQYILSTC EQPYLLDQML AGYREVSRAF TFSAEVKQGS FPGLPGRVFI  240
SKTPEWTSNV VYYNKTEYLR VQHAVKHGVR GSIALPIFED DPLEMSCCAV LELVTTKEKP  300
DFDLEMETVC HALQAVNLRS TTPPRLYPQC LSNNQMAALA EITDVLRAVC HAHRLPLALT  360
WIPCSYNQRV GDENIRVRVR EGKASLNEKC ILCIEGTACY VNDGDLQGFV HACAEHYLEE  420
AQGIVGKALQ SNHPFFFPDV KEYDISEYPL VHHARKFGLN AAVAIRLRSM YTGNDDYILE  480
FFLPLNMKGS TEQQLLLNNL SGTMQRICKS LRTVSDAELV GAEGSQFAFQ KELVPNFQTE  540
AISRKTTSRE ALLDSSLNSV DQMPLPLDGL DVFESKTIGL EPNGPREQTS GSRRLTEKRR  600
STAEKNVSLS VLQQYFSGSL KDAAKSIGVC PTTLKRICRQ HGISRWPSRK INKVNRSLKK  660
IQTVLDSVQG VEGGLKFDPT TGGLVAAADF DAGTSSSILF PTKKLSVQNP ESLTQHESAA  720
ISSVCPSTNH ADNSAIKLEE DHFIMGGGNQ VGPPRSRTRS QFMPNTKNNT NTNTNTNTNT  780
NTNNNNNNNS DSLVGECCDD SKSTGLLLDA RPLQPPDEMD TTGMDGGDNA GMMMMEADDD  840
GVVIEHNQPT TSSGMTDSSS GSGSGMTDSS SRSGSRAHGS SSSSPSFGEQ QEHTKLQTSS  900
KITVKATYKE DTVRFKFEPC GGCHKLYDEV GKRFKLHMGT FQLKYLDDEE EWVMLVTDSD  960
LQECLDILDF VGTCTVKFLV RDATCSMGSS GSTNCFLAGV S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein