PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028126367.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 378aa    MW: 42044.1 Da    PI: 5.1303
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028126367.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA42.49.7e-14196227132
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrk 32 
                     C++C+t kT+ WR g++g+ ++Cn CG+++  
  XP_028126367.1 196 CAHCHTAKTSKWRTGSEGPLSICNGCGIKFEE 227
                     ****************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MSEVSRDLGA SAEPNKIGPD YFAFYAREVA ELLSQDEDFL AFSSETSEVA GMMNGDVGEK  60
DATGSNHSGK DNTFSGSLFC NGVGARLSDF KKERLKALLR QSVVTLSQEV DEMLDPVIAI  120
RHIQSQLRYK KSLSNYSATA CDEGDVEQHP HKKIKLSSSI SIPLHASPIG AKDSGNKGKD  180
ADLPENGRSN GVKKNCAHCH TAKTSKWRTG SEGPLSICNG CGIKFEEEKE PPSINDHNKE  240
SCLVSNIGAD DEYREVDDDM QFLLENDAPK VEAVVKKHSD EVFTMLGHME QQLEELLDTV  300
LSNCRLMTLS EKQQLRKLIQ KLPPRNLDRV VEIIQCNKPF GKYSADEIHV DLEKQDNVTL  360
WRLYYYVKAV DNARELSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.22e-10GATA family protein