PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028126253.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 282aa    MW: 31129.1 Da    PI: 10.3082
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028126253.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.52.2e-19164197134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C+ C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_028126253.1 164 CADCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 197
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MTPTYLNSSS SPFPVSFSED QKQHQLHSSA KTQASSVGTS SSSLLTHVFT NSIQDQGGCY  60
HKEEVHQLKY QQQANNFASQ DGLHDHAIPK SVSDHGLKSS LWKKQDIEHE VHSDQNGSAK  120
SKSSKTRVML KMKFEDQKQP SSPLETYNSN NSFSSNISNP SRVCADCNTT KTPLWRSGPR  180
GPKSLCNACG IRQRKARRAM AAAAANGATL AAETSTMKIT KVQHKHQKRS KLATKSHGRK  240
KLCFEDFLIS LSKNLAFHRI FPQDEKEAAI LLMALSCGLV RG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.12e-16GATA family protein