PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028126248.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 351aa MW: 39388.2 Da PI: 5.9781

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028126248.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.7e-17	21	68	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++++++G g+W+t+++ g+ R++k+c++rw +yl XP_028126248.1 21 KGLWSPEEDEKLFNYITRFGVGCWSTVPKLAGLQRCGKSCRLRWINYL 68 678*******************************************97 PP
2	Myb_DNA-binding	46.8	7e-15	74	117	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++ +++ lG++ W+ Ia+ ++ gRt++++k++w++ XP_028126248.1 74 RGMFSQQEEDLIISLHEALGNR-WAQIAAQLP-GRTDNEVKNFWNS 117 788*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MHNKSPMGRQ SCCVVKPKLR KGLWSPEEDE KLFNYITRFG VGCWSTVPKL AGLQRCGKSC 60 RLRWINYLRP DLKRGMFSQQ EEDLIISLHE ALGNRWAQIA AQLPGRTDNE VKNFWNSCLK 120 KKLMKQGIDP NTHKALISET ELIKDAKNCS EKHSSLANVS ASTEANQAFP VDSTSYYDGG 180 LITDTTRNQF GTKPIFDPLF LSEFQVSTDP IVYNSNLLTQ YQQNMDLNPN FGFSAMPNLA 240 NFDHGNMSEM DFSDNSASQM SSFLFNDVKE SSSNSSNVNS HTGFQINNMV ENSAFSWGVE 300 NKLGPVFQCQ INGSKSEEMK PSPWPESFGS YPLMSPSEDL AGASMDIFQQ I

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MHNKSPMGRQ SCCVVKPKLR KGLWSPEEDE KLFNYITRFG VGCWSTVPKL AGLQRCGKSC  60
RLRWINYLRP DLKRGMFSQQ EEDLIISLHE ALGNRWAQIA AQLPGRTDNE VKNFWNSCLK  120
KKLMKQGIDP NTHKALISET ELIKDAKNCS EKHSSLANVS ASTEANQAFP VDSTSYYDGG  180
LITDTTRNQF GTKPIFDPLF LSEFQVSTDP IVYNSNLLTQ YQQNMDLNPN FGFSAMPNLA  240
NFDHGNMSEM DFSDNSASQM SSFLFNDVKE SSSNSSNVNS HTGFQINNMV ENSAFSWGVE  300
NKLGPVFQCQ INGSKSEEMK PSPWPESFGS YPLMSPSEDL AGASMDIFQQ I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	9e-79	MYB family protein