PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028125946.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | YABBY | ||||||||
Protein Properties | Length: 139aa MW: 15571.7 Da PI: 9.0193 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 176.5 | 1.7e-54 | 1 | 133 | 23 | 170 |
YABBY 23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvir 117 +vsvP +s++++vtvrCGhC++llsvn+ q+l+ ++ ++++ +++ + + s+s+ ++ e+ ++e pr+pp +r XP_028125946.1 1 MVSVPCSSMLTIVTVRCGHCANLLSVNMGALLQTLPHQDL-------------QKQQFSFEDASKDSGSSSKCNKF-GAFESAEHEPPRMPP-VR 80 59***************************99999998873.............33333343333333333333333.335677889999999.8* PP YABBY 118 PPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 PPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl XP_028125946.1 81 PPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 133 ***************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MVSVPCSSML TIVTVRCGHC ANLLSVNMGA LLQTLPHQDL QKQQFSFEDA SKDSGSSSKC 60 NKFGAFESAE HEPPRMPPVR PPEKRQRVPS AYNRFIKEEI QRIKASNPDI SHREAFSTAA 120 KNWAHFPHIH FGLKLDGNQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 8e-51 | YABBY family protein |