PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028125945.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | YABBY | ||||||||
Protein Properties | Length: 141aa MW: 15813 Da PI: 9.0193 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 181.4 | 5.1e-56 | 1 | 135 | 23 | 170 |
YABBY 23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvss.eklsenedeevprvppvi 116 +vsvP +s++++vtvrCGhC++llsvn+ q+l+ ++ + ++++++ + +++s s+s+ + + e+ ++e pr+pp + XP_028125945.1 1 MVSVPCSSMLTIVTVRCGHCANLLSVNMGALLQTLPHQDL-------------QLQKQQFSFEDASKDSGSSSKCNkFGAFESAEHEPPRMPP-V 81 59***************************99999998773.............3344444444444444333333302335678889999999.9 PP YABBY 117 rPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 rPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl XP_028125945.1 82 RPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 135 ****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence |
MVSVPCSSML TIVTVRCGHC ANLLSVNMGA LLQTLPHQDL QLQKQQFSFE DASKDSGSSS 60 KCNKFGAFES AEHEPPRMPP VRPPEKRQRV PSAYNRFIKE EIQRIKASNP DISHREAFST 120 AAKNWAHFPH IHFGLKLDGN Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 9e-52 | YABBY family protein |