PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028125942.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | YABBY | ||||||||
Protein Properties | Length: 147aa MW: 16574 Da PI: 9.7978 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 184.2 | 7e-57 | 4 | 141 | 20 | 170 |
YABBY 20 tilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvss.eklsenedeevprvp 113 i+ vsvP +s++++vtvrCGhC++llsvn+ q+l+ ++ + ++++++ + +++s s+s+ + + e+ ++e pr+p XP_028125942.1 4 RIIHVSVPCSSMLTIVTVRCGHCANLLSVNMGALLQTLPHQDL-------------QLQKQQFSFEDASKDSGSSSKCNkFGAFESAEHEPPRMP 85 6999****************************99999998773.............334444444444444433333330233567888999999 PP YABBY 114 pvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 p +rPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl XP_028125942.1 86 P-VRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 141 9.9****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence |
MIKRIIHVSV PCSSMLTIVT VRCGHCANLL SVNMGALLQT LPHQDLQLQK QQFSFEDASK 60 DSGSSSKCNK FGAFESAEHE PPRMPPVRPP EKRQRVPSAY NRFIKEEIQR IKASNPDISH 120 REAFSTAAKN WAHFPHIHFG LKLDGNQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 4e-52 | YABBY family protein |