PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028125723.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family AP2
Protein Properties Length: 497aa    MW: 54594.9 Da    PI: 7.3098
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028125723.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.3e-17165214155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  XP_028125723.1 165 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 214
                     78*******************......55************************997 PP

2AP239.41.5e-12257307155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV+ +k  grW+A+   +     +k+ +lg f+++ eAa+a+++a+ k +g
  XP_028125723.1 257 SKYRGVTLHK-CGRWEARMGQF--L-GKKYMYLGLFDSEVEAARAYDKAAIKCNG 307
                     89********.7******5553..2.26**********99**********99776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 497 aa     Download sequence    
MLDLNVDVVT EESTCDELEK KKIATRKLLE GDDSVTSNSS VVVNADEAPN NAADEDSNSN  60
MISPFNFDVF SRGKGFGVGN IVAIGDECDR NLAPLLVTRQ LFPVGDSEEI GSGSSSSATS  120
LLRPQWLNLS FPDSGAAAGL KAEKKPQPQQ QPVKKSRRGP RSRSSQYRGV TFYRRTGRWE  180
SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVEADIN FTIKDYEDDM KEMTNLTKEE  240
FVHILRRQST GFSRGSSKYR GVTLHKCGRW EARMGQFLGK KYMYLGLFDS EVEAARAYDK  300
AAIKCNGREA VTNFEPSTYE GEMISTDANN ADGGTSQNLD LNLWIFPPAD VPKGNVNVRD  360
IQSHCAACEM PDGKRPKVES SISTPTDGQN TRGLTMASKH PPIRSGIYPS FTPNYEERAI  420
GKSTEALPSL AFSNWAWQMH SHSVVSPVAP FSTAASSGFS SPNSTAALPA TFPPQNKTAH  480
KLYIPTPTTN ISHFYNH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.38e-98AP2 family protein