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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028125723.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 497aa MW: 54594.9 Da PI: 7.3098 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.3e-17 | 165 | 214 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_028125723.1 165 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 214 78*******************......55************************997 PP | |||||||
2 | AP2 | 39.4 | 1.5e-12 | 257 | 307 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+ +lg f+++ eAa+a+++a+ k +g XP_028125723.1 257 SKYRGVTLHK-CGRWEARMGQF--L-GKKYMYLGLFDSEVEAARAYDKAAIKCNG 307 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 497 aa Download sequence |
MLDLNVDVVT EESTCDELEK KKIATRKLLE GDDSVTSNSS VVVNADEAPN NAADEDSNSN 60 MISPFNFDVF SRGKGFGVGN IVAIGDECDR NLAPLLVTRQ LFPVGDSEEI GSGSSSSATS 120 LLRPQWLNLS FPDSGAAAGL KAEKKPQPQQ QPVKKSRRGP RSRSSQYRGV TFYRRTGRWE 180 SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVEADIN FTIKDYEDDM KEMTNLTKEE 240 FVHILRRQST GFSRGSSKYR GVTLHKCGRW EARMGQFLGK KYMYLGLFDS EVEAARAYDK 300 AAIKCNGREA VTNFEPSTYE GEMISTDANN ADGGTSQNLD LNLWIFPPAD VPKGNVNVRD 360 IQSHCAACEM PDGKRPKVES SISTPTDGQN TRGLTMASKH PPIRSGIYPS FTPNYEERAI 420 GKSTEALPSL AFSNWAWQMH SHSVVSPVAP FSTAASSGFS SPNSTAALPA TFPPQNKTAH 480 KLYIPTPTTN ISHFYNH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 8e-98 | AP2 family protein |