PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028124805.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 1013aa MW: 111210 Da PI: 4.6909 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.4 | 6.7e-18 | 38 | 84 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_028124805.1 38 KGQWTAEEDDILCKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 84 799****************************9.************986 PP | |||||||
2 | Myb_DNA-binding | 59.4 | 7.7e-19 | 90 | 136 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++ Ede++v++v ++G++ W+tIa++++ gR +kqc++rw+++l XP_028124805.1 90 KGPWSKGEDEIIVELVDKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 136 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 49 | 1.4e-15 | 142 | 184 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l+ a++ +G++ W+ + ++ gRt++++k++w+ XP_028124805.1 142 KEAWTQEEELTLISAHQIYGNK-WAELTKFLP-GRTDNSIKNHWN 184 579*******************.*********.***********8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 1013 aa Download sequence |
MMESDRTNST PSDGGTDGLQ RMRSLHGRTS GPTRRSTKGQ WTAEEDDILC KAVQRFKGKN 60 WKKIAECFKD RTDVQCLHRW QKVLNPELVK GPWSKGEDEI IVELVDKYGP KKWSTIAQHL 120 PGRIGKQCRE RWHNHLNPNI SKEAWTQEEE LTLISAHQIY GNKWAELTKF LPGRTDNSIK 180 NHWNSSVKKK LDSYLASGLL AQFQGLPHVS YPNQSIPSSS STMPLSSGDD SVPKDGTEAE 240 EISECSQGST VVGCSQSTSD MPNAVAHTRE ECRLTEESGH GKEDPSFSPA SCSENYHTAF 300 QEVAFCMPEV PCDFGGSSNY LEQNYTPGWG SYAGKDWQLN SNESSEFLMH CIGGNENPEV 360 VPFQLQTSVG LNVSPSVGNL VLGSGDPEHM LIHEDGCCRV IYPEAEMDGY FSSTKCSDIM 420 DFNESADSLL YQPSNYQLPD PPKSDMLGTL CSQPFDVQSQ LPPDDSALFF GSDPNQFNDL 480 SHGNEEEELA KSPNDDFIYA NDSNNSPGNN GKDNMGQQDE PDQARNSLKL VPVDAFSSGP 540 SNNIQSHSSL EENPIVPTEQ QETGALFYEP PRFPSLDIPF FSCDLIQSGT DMQQEYSPLG 600 IRQLMMSSMN CFTPFRLWDS PLRDDSPDAV LKSAAKTFTG TPSILKKRNR DLASPMSEKR 660 SEKKLESGMN QESFSSLARD FSRLDVMLDG NGNPKAPLLS PAPNQKGESG NSTSNKENSS 720 HALEAGKEEG RDAKTKGDLD AATKNVQQAS AVLVEHNMND LLFFSPDRYE DRALGTSIRT 780 LGIQCSRRLE TTSNQVALSE SSSGNPCSSI VSSPTVSGRK DKSRLVAAVS AQSVPASNPL 840 EIMAGSSGND AGVENLFGET PFKRSIESPS AWKSPWFINS FLPGPRIDTD ITIEDIGYFM 900 SPGDRSYDAI GLMKQLSEHT AAAFADAQEV LGDETPETIL KQRRSNNQKL DLENCALNSQ 960 PDNHSLLASN VPTERRVLDF SECGTPGKGK ESGKFSTVTI LSSPSSYLLK GCR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G32730.2 | 0.0 | MYB family protein |