PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028124248.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 275aa MW: 31263 Da PI: 7.0491 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.7 | 2e-18 | 77 | 130 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rqV +WFqNrRa++k XP_028124248.1 77 KKRRLNMEQVKALEKSFELGNKLEPERKLQLARALGLQPRQVAIWFQNRRARWK 130 456899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 128.7 | 2.3e-41 | 76 | 166 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqvk+LE+sFe +kLeperK +lar+Lglqprqva+WFqnrRAR+ktkqlE+dy+ Lkr+++alk++n++L++++++L +el XP_028124248.1 76 EKKRRLNMEQVKALEKSFELGNKLEPERKLQLARALGLQPRQVAIWFQNRRARWKTKQLERDYNLLKRKFEALKADNDALQAHNKKLVSEL 166 69*************************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MAFVSAEFMF QPREDNHSPS TSPNILSSCS PQDFHSVSSS PAQMRRSMSF SGIGSKCEEM 60 HVDDEMSDDD GSPLGEKKRR LNMEQVKALE KSFELGNKLE PERKLQLARA LGLQPRQVAI 120 WFQNRRARWK TKQLERDYNL LKRKFEALKA DNDALQAHNK KLVSELLALK GRESNGIGPI 180 NLNKETEASW SKGSEKSCDF NLCTTTTHQS TNKHVFLNSS TEAANVAHLL QTSSRSDLQC 240 QKIDQMVPDE SFCNMFTGVD DHSGFWPWPE QQHFH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 125 | 133 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 2e-78 | HD-ZIP family protein |