PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028124073.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 372aa MW: 42617.8 Da PI: 5.3433

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028124073.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.6	5.7e-18	146	191	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + W +eEd llv++vk++G + W+ Ia++++ gR +kqc++rw+++l XP_028124073.1 146 QQWAPEEDRLLVKLVKEYGEKKWSHIAQMLN-GRMGKQCRERWHNHL 191 68***************************.***********97 PP
2	Myb_DNA-binding	54.5	2.7e-17	199	239	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 W++eE+ +l+++++q G++ W++Iar+m+ gRt++ +k++w+ XP_028124073.1 199 IWSEEEEMKLIEVHRQIGNK-WAAIAREMP-GRTENTIKNHWN 239 6*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MENGLLIGSS SPNGLYQNFP NFDKFPIQGS SSSNLSLAVL APFYDPFVPF QTSSINGCSN 60 NRFHLNASIP SGSNGANHVM HGGQNVGFLN YPPRILLEAL NQDQTFQPKN YQTFGSTNVN 120 LSDEVSCLTK EGGNRKKIES KRRRMQQWAP EEDRLLVKLV KEYGEKKWSH IAQMLNGRMG 180 KQCRERWHNH LRPDIKKDIW SEEEEMKLIE VHRQIGNKWA AIAREMPGRT ENTIKNHWNA 240 AKRRRFSKCK GQYSCLLQDY IKSLPSDSTV TDGQESPSSD SNLRIVDNTD LEEDNKDQKD 300 PTSDSNKAVD YQFYEKMAVE EDDFGSMLNE CNKTELEIEM EMMPAELMDK EMSFDVNNKD 360 MDLLEMLCQG IF

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MENGLLIGSS SPNGLYQNFP NFDKFPIQGS SSSNLSLAVL APFYDPFVPF QTSSINGCSN  60
NRFHLNASIP SGSNGANHVM HGGQNVGFLN YPPRILLEAL NQDQTFQPKN YQTFGSTNVN  120
LSDEVSCLTK EGGNRKKIES KRRRMQQWAP EEDRLLVKLV KEYGEKKWSH IAQMLNGRMG  180
KQCRERWHNH LRPDIKKDIW SEEEEMKLIE VHRQIGNKWA AIAREMPGRT ENTIKNHWNA  240
AKRRRFSKCK GQYSCLLQDY IKSLPSDSTV TDGQESPSSD SNLRIVDNTD LEEDNKDQKD  300
PTSDSNKAVD YQFYEKMAVE EDDFGSMLNE CNKTELEIEM EMMPAELMDK EMSFDVNNKD  360
MDLLEMLCQG IF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	5e-58	MYB family protein