PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028123654.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Dof
Protein Properties Length: 318aa    MW: 35543.8 Da    PI: 6.6169
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028123654.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.81.3e-3951111262
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                     +++a kcprCdst+tkfCyynnysl+qPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+s
  XP_028123654.1  51 HDQAPKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVS 111
                     68899*****************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MALTSLQVCM DSSDWLQDTI HNESPMDSSS PSGDMLTCPR PLMERRLRPQ HDQAPKCPRC  60
DSTHTKFCYY NNYSLTQPRY FCKTCRRYWT KGGTLRNIPV GGGCRKNKKV SSKKSNDNQS  120
VNHQNSGGSS SHSPTDLQLS FPEVQLSHLT NLLGNHGGLG NPSFLESKYN ANVMFENPRP  180
IDFMESRYEG LVGISRNHDF MGSGDLAMMG GLGHDMSHDH GLTMTPNFHG LCSPFGEKLF  240
STPEANLSDQ VPFMDTCQRL MLPYEGHIED QTTMDVKPNT KLLTLEWHDQ EASDVGKDSF  300
GYLNSMGSWT GMMNGYGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62940.15e-40Dof family protein